RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DNAJC10Q8IXB1 793 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 CRACR2BQ8N4Y2 399 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 FAM169BQ8N8A8 192 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 AJUBAQ96IF1 538 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 MARCH2Q9P0N8 246 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 FAM86C2PA6NEL3 165 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 HGSO14964 777 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 SMAD7O15105 426 aaKnown RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 VAMP4O75379 141 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 KLHL18O94889 574 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 FBLP22087 321 aaKnown RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 STAT5AP42229 794 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 TESK1Q15569 626 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 PPP2R5EQ16537 467 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 DPY19L1Q2PZI1 675 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 LSM12Q3MHD2 195 aaKnown RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 E4F1Q66K89 784 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 POMZP3Q6PJE2 187 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 TEPPQ6URK8 271 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 RUFY4Q6ZNE9 571 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 ANKS3Q6ZW76 656 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 RALYLQ86SE5 291 aaKnown RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 REXO1L1PQ8IX06 675 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 CKAP2LQ8IYA6 745 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 OR6P1Q8NGX9 317 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 PMFBP1Q8TBY8 1022 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 PHOSPHO1Q8TCT1 267 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 VOPP1Q96AW1 172 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 ADOQ96SZ5 270 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 PTPN18Q99952 460 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 YIPF4Q9BSR8 244 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 HIRIP3Q9BW71 556 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 PRKAG3Q9UGI9 489 aa3.74□□□□□ -1.81
HMGB1P35-201ENST00000503360 FOXS1O43638 330 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 TADA3O75528 432 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 COL6A1P12109 1028 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 COMTP21964 271 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 ATXN1P54253 815 aaKnown RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 NRN1LQ496H8 165 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 USP39Q53GS9 565 aaKnown RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 TNNI3KQ59H18 835 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 MBLAC2Q68D91 279 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 IGFL4Q6B9Z1 124 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 Q6ZUG5 572 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZNF513Q8N8E2 541 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 ADCY4Q8NFM4 1077 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 HNRNPLLQ8WVV9 542 aaKnown RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 DLL4Q9NR61 685 aa3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 AURKAIP1Q9NWT8 199 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 R3HCC1Q9Y3T6 440 aaKnown RBP3.73□□□□□ -1.81
HMGB1P35-201ENST00000503360 TCRBV5S2A0A599 114 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 H7BY64 318 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 U2SURPO15042 1029 aaKnown RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 KLF4O43474 513 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 PLS3P13797 630 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZNF143P52747 638 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 RPL11P62913 178 aaKnown RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 SLC7A5Q01650 507 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 GNPTABQ3T906 1256 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 SOGA3Q5TF21 947 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 AGBL4Q5VU57 503 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 CYP4F22Q6NT55 531 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 TRMT10BQ6PF06 316 aaKnown RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 DPH6Q7L8W6 267 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 TEX2Q8IWB9 1127 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 SCUBE1Q8IWY4 988 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 TTLL11Q8NHH1 800 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 CACTINQ8WUQ7 758 aaKnown RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 LMF1Q96S06 567 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 PRRX2Q99811 253 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 TRIM55Q9BYV6 548 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 PDGFDQ9GZP0 370 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 KATNBL1Q9H079 304 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZNF703Q9H7S9 590 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 CYP26B1Q9NR63 512 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 ACTR10Q9NZ32 417 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 CLEC1BQ9P126 229 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 EMC9Q9Y3B6 208 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 TIMM13Q9Y5L4 95 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 SLC30A1Q9Y6M5 507 aa3.72□□□□□ -1.81
HMGB1P35-201ENST00000503360 A0A1W2PQH9 124 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 RAD17O75943 681 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 LRG1P02750 347 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 EPHX1P07099 455 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 CASP7P55210 303 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 RAB33AQ14088 237 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 NBPF6Q5VWK0 638 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 PCSK4Q6UW60 755 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 MAMDC4Q6UXC1 1216 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 POLNQ7Z5Q5 900 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 LDLRAD3Q86YD5 345 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZG16BQ96DA0 208 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 NBPF4Q96M43 638 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 CRAMP1Q96RY5 1269 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 CSRNP2Q9H175 543 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 CROTQ9UKG9 612 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZDHHC9Q9Y397 364 aa3.71□□□□□ -1.82
HMGB1P35-201ENST00000503360 ANKRD34BA5PLL1 514 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms