RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 DDX60LQ5H9U9 1706 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 FAM196BA6NMK8 535 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 ENC1O14682 589 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 IMPDH2P12268 514 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 PDIA5Q14554 519 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 KCNB1Q14721 858 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 UBE2SQ16763 222 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 DOK7Q18PE1 504 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 SHROOM1Q2M3G4 852 aaPredicted RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 KIF4BQ2VIQ3 1234 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 HSP90B2PQ58FF3 399 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 MEX3CQ5U5Q3 659 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 ANKRD40Q6AI12 368 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 TTBK2Q6IQ55 1244 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 GALNT17Q6IS24 598 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 DPP8Q6V1X1 898 aaPredicted RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 C15orf52Q6ZUT6 534 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 KRT25Q7Z3Z0 450 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 TMTC1Q8IUR5 882 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 RBM12BQ8IXT5 1001 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 MB21D1Q8N884 522 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 RIN2Q8WYP3 895 aaPredicted RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 RBM17Q96I25 401 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 DUSP9Q99956 384 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 NUDT12Q9BQG2 462 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 TUBGCP2Q9BSJ2 902 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 CENPHQ9H3R5 247 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 DDX20Q9UHI6 824 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 GUCA1BQ9UMX6 200 aa5.7□□□□□ -1.5
CLDND1-208ENST00000503004 TTF2Q9UNY4 1162 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 REXO2Q9Y3B8 237 aaKnown RBP5.7□□□□□ -1.5
CLDND1-208ENST00000503004 TAF1LQ8IZX4 1826 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 NAV1Q8NEY1 1877 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 A0A1B0GUA9 196 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 LGALS16A8MUM7 142 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 LAD1O00515 517 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 EDIL3O43854 480 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 BBOX1O75936 387 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 TRIM37O94972 964 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 PLCG2P16885 1265 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 TRIM21P19474 475 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ALDH1B1P30837 517 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 INPP5BP32019 993 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ARHGAP25P42331 645 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 TNNI2P48788 182 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 CACNB3P54284 484 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 PPARDQ03181 441 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 NFIAQ12857 509 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 STIM1Q13586 685 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 THEMIS2Q5TEJ8 643 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 WDR59Q6PJI9 974 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 CYP26C1Q6V0L0 522 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 RSRC2Q7L4I2 434 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 KIAA0895Q8NCT3 520 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 GLIS3Q8NEA6 775 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ATL2Q8NHH9 583 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ZNF507Q8TCN5 953 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 EZH1Q92800 747 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 PNKPQ96T60 521 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 HINFPQ9BQA5 517 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 LZTS2Q9BRK4 669 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ABCB6Q9NP58 842 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 KCNQ5Q9NR82 932 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 EXOC1Q9NV70 894 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 LUC7L2Q9Y383 392 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 PCDHAC2Q9Y5I4 1007 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 GAKO14976 1311 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 PPP1R11O60927 126 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 NDUFA10O95299 355 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 IDEP14735 1019 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 FECHP22830 423 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 CHMP4BP1P59074 171 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ZBED6P86452 979 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 NAA25Q14CX7 972 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 ZRSR2Q15696 482 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 KCTD1Q719H9 257 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 OR8K1Q8NGG5 319 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 SPDL1Q96EA4 605 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC51Q96ER9 411 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 RIOX1Q9H6W3 641 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 BLOC1S4Q9NUP1 217 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 MAGEC2Q9UBF1 373 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 LRWD1Q9UFC0 647 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 SAMM50Q9Y512 469 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 EPN1Q9Y6I3 576 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-208ENST00000503004 NHSQ6T4R5 1651 aa5.69□□□□□ -1.5
CLDND1-208ENST00000503004 AFF2P51816 1311 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CDK5RAP2Q96SN8 1893 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CTAGE9A4FU28 777 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 MYMKA6NI61 221 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RASSF10A6NK89 507 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 PPEF1O14829 653 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 EEF1GP26641 437 aaKnown RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 TPP2P29144 1249 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-208ENST00000503004 RANBP1P43487 201 aa5.68□□□□□ -1.5
CLDND1-208ENST00000503004 CYP27A1Q02318 531 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms