RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CFDP1Q9UEE9 299 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P21-201ENST00000502313 FBXL21Q9UKT6 434 aa5.19□□□□□ -1.58
HMGB1P21-201ENST00000502313 SLC45A1Q9Y2W3 748 aa5.19□□□□□ -1.58
HMGB1P21-201ENST00000502313 MYOM3Q5VTT5 1437 aa5.19□□□□□ -1.58
HMGB1P21-201ENST00000502313 CAMSAP2Q08AD1 1489 aa5.19□□□□□ -1.58
HMGB1P21-201ENST00000502313 ATP7AQ04656 1500 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 SUPT6HQ7KZ85 1726 aaKnown RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 WIPF1O43516 503 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 ZEB2O60315 1214 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 EPHX1P07099 455 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 MYBP10242 640 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 CAP2P40123 477 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 ALDH5A1P51649 535 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 HNRNPMP52272 730 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 AK2P54819 239 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 PPP2R2AP63151 447 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 SUMO1P63165 101 aaKnown RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 RBM10P98175 930 aaKnown RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 NRG1Q02297 640 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 KRT72Q14CN4 511 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 NBPF9Q3BBW0 867 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 INAVAQ3KP66 663 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 CDCA2Q69YH5 1023 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 IQSEC1Q6DN90 963 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 LDHAL6AQ6ZMR3 332 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 AGGF1Q8N302 714 aaeCLIP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 C2CD4AQ8NCU7 369 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 OSBP2Q969R2 916 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 SCLYQ96I15 445 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 CENPOQ9BU64 300 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 LGR6Q9HBX8 967 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 FAM105AQ9NUU6 356 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 GIT1Q9Y2X7 761 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 PCDHB12Q9Y5F1 795 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 CCDC141Q6ZP82 1450 aa5.18□□□□□ -1.58
HMGB1P21-201ENST00000502313 DHX29Q7Z478 1369 aaKnown RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 ABCC5O15440 1437 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 MROH1Q8NDA8 1641 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 hCG_1642624A0A1W2PR95 340 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 A6NCN8 305 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 A6NNZ2 444 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 ERC2O15083 957 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 UBOX5O94941 541 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 ASLP04424 464 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 C6orf222P0C671 652 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 SPATA31C1P0DKV0 1188 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 PABPC1P11940 636 aaKnown RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 CALRP27797 417 aaKnown RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 RECQLP46063 649 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 SCNN1BP51168 640 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 USP14P54578 494 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 COL9A3Q14050 684 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 SLBPQ14493 270 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 TRIM61Q5EBN2 209 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 LETMD1Q6P1Q0 360 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 NSMFQ6X4W1 530 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 TMEM192Q8IY95 271 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 STK11IPQ8N1F8 1099 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 NXPE1Q8N323 547 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 OR2W6PQ8NHA6 318 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 WHAMMQ8TF30 809 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 UTP4Q969X6 686 aaKnown RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 FGD4Q96M96 766 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 DSCC1Q9BVC3 393 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 ASPNQ9BXN1 380 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 SLC13A1Q9BZW2 595 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 ALDH8A1Q9H2A2 487 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 WHRNQ9P202 907 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 KCNG1Q9UIX4 513 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 A2MP01023 1474 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 SHANK2Q9UPX8 1470 aa5.17□□□□□ -1.58
HMGB1P21-201ENST00000502313 PTPRKQ15262 1439 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 FGD6Q6ZV73 1430 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 BLACEA4D250 179 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ZNF891A8MT65 544 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 F8W735 103 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 TM4SF5O14894 197 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 TIAF1O95411 115 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 SLC5A1P13866 664 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ZKSCAN1P17029 563 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 GRIK1P39086 918 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 MAPK9P45984 424 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 PREPP48147 710 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 UVSSAQ2YD98 709 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 DACT2Q5SW24 774 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ZNF385CQ66K41 422 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 OTOP3Q7RTS5 596 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 PNMA8AQ86V59 439 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 PPFIBP1Q86W92 1011 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 SLC41A1Q8IVJ1 513 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 TMEM130Q8N3G9 435 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 BEND7Q8N7W2 519 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms