RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 NUP62CLQ9H1M0 184 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 GOLPH3LQ9H4A5 285 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 AS3MTQ9HBK9 375 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 CXXC1Q9P0U4 656 aaPredicted RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 FBXO2Q9UK22 296 aaPredicted RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 HPSEQ9Y251 543 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 DOCK1Q14185 1865 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 IQCA1LA6NCM1 817 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 KINO60870 393 aaKnown RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 GNRH1P01148 92 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 PTPRAP18433 802 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 MARCKSP29966 332 aaPredicted RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 INPP5BP32019 993 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 EPHX2P34913 555 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 NONOQ15233 471 aaKnown RBP eCLIP8.7□□□□□ -1.029e-8■■■■□ 26.4
CDC42-205ENST00000498236 OCLNQ16625 522 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 FAM83BQ5T0W9 1011 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 L1TD1Q5T7N2 865 aaKnown RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 SHC4Q6S5L8 630 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 GAS2L3Q86XJ1 694 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 SPICE1Q8N0Z3 855 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 C4orf32Q8N8J7 132 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDC42-205ENST00000498236 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 COA7Q96BR5 231 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 C12orf42Q96LP6 360 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 WRNIP1Q96S55 665 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 RANBP17Q9H2T7 1088 aaKnown RBP8.7□□□□□ -1.02
CDC42-205ENST00000498236 PSTPIP2Q9H939 334 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 PICK1Q9NRD5 415 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 PCDHA1Q9Y5I3 950 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 SCN4AP35499 1836 aa8.7□□□□□ -1.02
CDC42-205ENST00000498236 UTRNP46939 3433 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 WDR90Q96KV7 1748 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 USP2O75604 605 aaPredicted RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 INHAP05111 366 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 PFKFB1P16118 471 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 PRPHP41219 470 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 MRE11P49959 708 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 NDUFA8P51970 172 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 BACE1P56817 501 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 IKQ13123 557 aaPredicted RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 NEK8Q86SG6 692 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 PNMA8AQ86V59 439 aaPredicted RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 FEZ1Q99689 392 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 NAP1L4Q99733 375 aaKnown RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 FUCA2Q9BTY2 467 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 TNMDQ9H2S6 317 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 ETNK1Q9HBU6 452 aa8.69□□□□□ -1.02
CDC42-205ENST00000498236 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.69□□□□□ -1.02
CDC42-205ENST00000498236 PAPPA2Q9BXP8 1791 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 LGR5O75473 907 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 ZNF202O95125 648 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 FOSP01100 380 aaPredicted RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 WEE1P30291 646 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 LONP1P36776 959 aaKnown RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 SYKP43405 635 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 ZNF174Q15697 407 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 INF2Q27J81 1249 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 PRAMEF18Q5VWM3 479 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 SND1Q7KZF4 910 aaKnown RBP eCLIP8.68□□□□□ -1.023e-6■■□□□ 12.2
CDC42-205ENST00000498236 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 KRT26Q7Z3Y9 468 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 PRPF38AQ8NAV1 312 aaKnown RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 TBCKQ8TEA7 893 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 ZKSCAN4Q969J2 545 aaPredicted RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 CLIC6Q96NY7 704 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 TSPY26PQ9H489 355 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 TAF1DQ9H5J8 278 aaPredicted RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
CDC42-205ENST00000498236 KCNH3Q9ULD8 1083 aa8.68□□□□□ -1.02
CDC42-205ENST00000498236 CYP3A7-CYP3A51PA0A087WV96 503 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 UNCXA6NJT0 531 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 ADM5C9JUS6 153 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 J3QL48 77 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 MEIS2O14770 477 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 OPLAHO14841 1288 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
CDC42-205ENST00000498236 ABCB11O95342 1321 aa8.67□□□□□ -1.02
CDC42-205ENST00000498236 CAVIN2O95810 425 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms