RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 MAMDC2Q7Z304 686 aaPredicted RBP8.25□□□□□ -1.09
MDM2-220ENST00000496959 PTPRN2Q92932 1015 aa8.25□□□□□ -1.09
MDM2-220ENST00000496959 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
MDM2-220ENST00000496959 ADAM7Q9H2U9 754 aa8.25□□□□□ -1.09
MDM2-220ENST00000496959 PRRG2O14669 202 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 DIAPH1O60610 1272 aaKnown RBP8.24□□□□□ -1.09
MDM2-220ENST00000496959 LRG1P02750 347 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 LONRF2Q1L5Z9 754 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 FAM209AQ5JX71 171 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 ZNF761Q86XN6 746 aaPredicted RBP8.24□□□□□ -1.09
MDM2-220ENST00000496959 TTLL11Q8NHH1 800 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 ADAMTS17Q8TE56 1095 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 CLIC6Q96NY7 704 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 NCANO14594 1321 aa8.24□□□□□ -1.09
MDM2-220ENST00000496959 ASXL2Q76L83 1435 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 NOBOXO60393 691 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 CYP7B1O75881 506 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 COL6A2P12110 1019 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 NAT1P18440 290 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 ADAM9Q13443 819 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 RASA3Q14644 834 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 MTDHQ86UE4 582 aaKnown RBP8.23□□□□□ -1.09
MDM2-220ENST00000496959 UHMK1Q8TAS1 419 aaKnown RBP8.23□□□□□ -1.09
MDM2-220ENST00000496959 WRNIP1Q96S55 665 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 SRPK1Q96SB4 655 aaKnown RBP8.23□□□□□ -1.09
MDM2-220ENST00000496959 TMEM209Q96SK2 561 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 IPPKQ9H8X2 491 aa8.23□□□□□ -1.09
MDM2-220ENST00000496959 ZC3H12BQ5HYM0 836 aaKnown RBP8.22□□□□□ -1.09
MDM2-220ENST00000496959 PRR31Q5SQ13 230 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 UBXN11Q5T124 520 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 ZFYVE27Q5T4F4 411 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 FOXB2Q5VYV0 432 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 CLEC4DQ8WXI8 215 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 MKL1Q969V6 931 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 SNTG2Q9NY99 539 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 DSEQ9UL01 958 aa8.22□□□□□ -1.09
MDM2-220ENST00000496959 FAM221BA6H8Z2 402 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 GABREP78334 506 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 GRIN1Q05586 938 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 KIAA2012Q0VF49 1180 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 PAK1Q13153 545 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 TUSC3Q13454 348 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 RGL3Q3MIN7 710 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 FAM26FQ5R3K3 315 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 PRAMEF18Q5VWM3 479 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 FAM124AQ86V42 546 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 KRTAP4-7Q9BYR0 210 aa8.21□□□□□ -1.1
MDM2-220ENST00000496959 DDX3XO00571 662 aaKnown RBP eCLIP8.2□□□□□ -1.1
MDM2-220ENST00000496959 NKRFO15226 690 aaKnown RBP eCLIP8.2□□□□□ -1.1
MDM2-220ENST00000496959 APPP05067 770 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 CELA3BP08861 270 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 HABP4Q5JVS0 413 aaKnown RBP8.2□□□□□ -1.1
MDM2-220ENST00000496959 MCTP2Q6DN12 878 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 RBM12BQ8IXT5 1001 aaKnown RBP8.2□□□□□ -1.1
MDM2-220ENST00000496959 DDX1Q92499 740 aaKnown RBP8.2□□□□□ -1.1
MDM2-220ENST00000496959 EXOC2Q96KP1 924 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 LNPKQ9C0E8 428 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 CROTQ9UKG9 612 aa8.2□□□□□ -1.1
MDM2-220ENST00000496959 C6orf222P0C671 652 aaPredicted RBP8.19□□□□□ -1.1
MDM2-220ENST00000496959 GUCY1A3Q02108 690 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 RTP5Q14D33 572 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
MDM2-220ENST00000496959 VASNQ6EMK4 673 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 TMC5Q6UXY8 1006 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.19□□□□□ -1.1
MDM2-220ENST00000496959 FERMT3Q86UX7 667 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 L2HGDHQ9H9P8 463 aa8.19□□□□□ -1.1
MDM2-220ENST00000496959 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
MDM2-220ENST00000496959 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 PRICKLE3O43900 615 aaPredicted RBP8.18□□□□□ -1.1
MDM2-220ENST00000496959 LTFP02788 710 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 FAHP16930 419 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 ZNF28P17035 718 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 IL13P35225 146 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 TXNDC5Q8NBS9 432 aaKnown RBP8.18□□□□□ -1.1
MDM2-220ENST00000496959 FBXW5Q969U6 566 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 DNAJC7Q99615 494 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 PDGFDQ9GZP0 370 aaPredicted RBP8.18□□□□□ -1.1
MDM2-220ENST00000496959 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
MDM2-220ENST00000496959 C9orf118A6NHY6 69 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 GSTA4O15217 222 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 CYP1A1P04798 512 aaPredicted RBP8.17□□□□□ -1.1
MDM2-220ENST00000496959 CNR2P34972 360 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 PLP2Q04941 152 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 BORAQ6PGQ7 559 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 NLGN4XQ8N0W4 816 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 SREK1Q8WXA9 508 aaKnown RBP8.17□□□□□ -1.1
MDM2-220ENST00000496959 LCORQ96JN0 433 aaPredicted RBP8.17□□□□□ -1.1
MDM2-220ENST00000496959 BDH2Q9BUT1 245 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 DLL4Q9NR61 685 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 CATSPERZQ9NTU4 200 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
MDM2-220ENST00000496959 WNT9AO14904 365 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms