RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 COASYQ13057 564 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
CHTOP-206ENST00000495554 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 NKRFO15226 690 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHTOP-206ENST00000495554 KRT86O43790 486 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-206ENST00000495554 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 PANK4Q9NVE7 773 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
CHTOP-206ENST00000495554 POTEB2H3BUK9 544 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.22
CHTOP-206ENST00000495554 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.22
CHTOP-206ENST00000495554 FAM26FQ5R3K3 315 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 KIAA1328Q86T90 577 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 SPICE1Q8N0Z3 855 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 OGFOD1Q8N543 542 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 TRIM10Q9UDY6 481 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 HDAC9Q9UKV0 1011 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 MYO6Q9UM54 1294 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.22
CHTOP-206ENST00000495554 OPLAHO14841 1288 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 AMPD2Q01433 879 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 LRRC41Q15345 812 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 CCDC65Q8IXS2 484 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
CHTOP-206ENST00000495554 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHTOP-206ENST00000495554 PLA2G4BP0C869 781 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 FKBP3Q00688 224 aaKnown RBP16.38■□□□□ 0.21
CHTOP-206ENST00000495554 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CTAGE15A4D2H0 777 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 E9PMD0 336 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 TBX3O15119 743 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CTAGE8P0CG41 777 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CXCL9Q07325 125 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
CHTOP-206ENST00000495554 BRD3Q15059 726 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 HAUS3Q68CZ6 603 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CTAGE6Q86UF2 777 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CTAGE4Q8IX94 777 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 MTMR14Q8NCE2 650 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 GLIS3Q8NEA6 775 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 ZBED3Q96IU2 234 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-206ENST00000495554 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 UIMC1Q96RL1 719 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
CHTOP-206ENST00000495554 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-206ENST00000495554 USH1GQ495M9 461 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 TMX2Q9Y320 296 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 SPDYE3A6NKU9 549 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 POTECB2RU33 542 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 SEC31AO94979 1220 aaKnown RBP16.37■□□□□ 0.21
CHTOP-206ENST00000495554 Q4G0T1 1027 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-206ENST00000495554 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-206ENST00000495554 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
CHTOP-206ENST00000495554 SPA17Q15506 151 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 PRR16Q569H4 304 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 ANKZF1Q9H8Y5 726 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 TRAF5O00463 557 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 TBC1D12O60347 775 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 CYP11B2P19099 503 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 SREBF1P36956 1147 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 EGFL6Q8IUX8 553 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 ERMNQ8TAM6 284 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
CHTOP-206ENST00000495554 EDEM3Q9BZQ6 932 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 766.4 ms