RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
VARS-228ENST00000495010 CAND2O75155 1236 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 CTSHP09668 335 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 RRP1P56182 461 aaKnown RBP16.53■□□□□ 0.24
VARS-228ENST00000495010 SP2Q02086 613 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 GHRHRQ02643 423 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 TOP1MTQ969P6 601 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
VARS-228ENST00000495010 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
VARS-228ENST00000495010 OPLAHO14841 1288 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 TREHO43280 583 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 LGALS2P05162 132 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 TCEAL5Q5H9L2 206 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 NEK9Q8TD19 979 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 APBB2Q92870 758 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
VARS-228ENST00000495010 USP26Q9BXU7 913 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
VARS-228ENST00000495010 RNPEPQ9H4A4 650 aa16.52■□□□□ 0.24
VARS-228ENST00000495010 NSUN3Q9H649 340 aaKnown RBP16.52■□□□□ 0.24
VARS-228ENST00000495010 LAMA4Q16363 1823 aa16.52■□□□□ 0.23
VARS-228ENST00000495010 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
VARS-228ENST00000495010 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
VARS-228ENST00000495010 NEDD9Q14511 834 aa16.51■□□□□ 0.23
VARS-228ENST00000495010 ALYREFQ86V81 257 aaKnown RBP16.51■□□□□ 0.23
VARS-228ENST00000495010 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
VARS-228ENST00000495010 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
VARS-228ENST00000495010 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
VARS-228ENST00000495010 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
VARS-228ENST00000495010 BRWD1Q9NSI6 2320 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 DCXO43602 365 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 NCK2O43639 380 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
VARS-228ENST00000495010 TRDNQ13061 729 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.23
VARS-228ENST00000495010 MTMR8Q96EF0 704 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
VARS-228ENST00000495010 SETD4Q9NVD3 440 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 CLDND1Q9NY35 253 aa16.5■□□□□ 0.23
VARS-228ENST00000495010 PALM3A6NDB9 673 aaPredicted RBP16.49■□□□□ 0.23
VARS-228ENST00000495010 STAM2O75886 525 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 CTNNB1P35222 781 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 CYFIP1Q7L576 1253 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 PIGSQ96S52 555 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
VARS-228ENST00000495010 PRKAG3Q9UGI9 489 aa16.49■□□□□ 0.23
VARS-228ENST00000495010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.48■□□□□ 0.23
VARS-228ENST00000495010 ERICH2A1L162 156 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 HOXC8P31273 242 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
VARS-228ENST00000495010 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 RTEL1Q9NZ71 1219 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 RWDD3Q9Y3V2 267 aa16.48■□□□□ 0.23
VARS-228ENST00000495010 PNMA6FA0A0J9YX94 578 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 FIBPO43427 364 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 RB1P06400 928 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 ICAM3P32942 547 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 SP4Q02446 784 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 SEC23AQ15436 765 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 RPAINQ86UA6 219 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 ADHFE1Q8IWW8 467 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 GPR20Q99678 358 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
VARS-228ENST00000495010 LMAN2LQ9H0V9 348 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
VARS-228ENST00000495010 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
VARS-228ENST00000495010 ZP2Q05996 745 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 GRM4Q14833 912 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 SMC5Q8IY18 1101 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 CUL5Q93034 780 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 POP1Q99575 1024 aaKnown RBP16.46■□□□□ 0.23
VARS-228ENST00000495010 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
VARS-228ENST00000495010 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 BMPR1AP36894 532 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 MRPS9P82933 396 aaKnown RBP16.45■□□□□ 0.22
VARS-228ENST00000495010 AAMPQ13685 434 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 SART3Q15020 963 aaKnown RBP16.45■□□□□ 0.22
VARS-228ENST00000495010 FAM26DQ5JW98 314 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
VARS-228ENST00000495010 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
VARS-228ENST00000495010 LMBR1Q8WVP7 490 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms