RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CDK7P50613 346 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 RTP1P59025 263 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 PTPN11Q06124 597 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 Q4G0T1 1027 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 PPP4R3AQ6IN85 833 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 PLA2G4DQ86XP0 818 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 DPF3Q92784 378 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 FOXP1Q9H334 677 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 AGO4Q9HCK5 861 aaKnown RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 JPH1Q9HDC5 661 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 TBC1D22BQ9NU19 505 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 MYL3P08590 195 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 PTGS1P23219 599 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 ITGA7Q13683 1181 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 NFRKBQ6P4R8 1299 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 CYFIP1Q7L576 1253 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 SESTD1Q86VW0 696 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 LENG9Q96B70 501 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.4
CPSF7-212ENST00000489728 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-212ENST00000489728 RIT2Q99578 217 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 GPR20Q99678 358 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
CPSF7-212ENST00000489728 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 K7ELQ4 463 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ATP9AO75110 1047 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ARP10275 920 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 PRR16Q569H4 304 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 CYP2W1Q8TAV3 490 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 SEPT1Q8WYJ6 367 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 SLC9A2Q9UBY0 812 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-212ENST00000489728 SMC3Q9UQE7 1217 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 EMSYQ7Z589 1322 aa12.57□□□□□ -0.4
CPSF7-212ENST00000489728 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 HAS3O00219 553 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 TBX3O15119 743 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 EDIL3O43854 480 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 PDCP20941 246 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 KRT76Q01546 638 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 NR5A1Q13285 461 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 ITGB3BPQ13352 177 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-212ENST00000489728 INF2Q27J81 1249 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
CPSF7-212ENST00000489728 ZNF746Q6NUN9 644 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-212ENST00000489728 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 FAM126BQ8IXS8 530 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-212ENST00000489728 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 FAM20AQ96MK3 541 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 ATP11BQ9Y2G3 1177 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
CPSF7-212ENST00000489728 DOCK5Q9H7D0 1870 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 H3BRB1 525 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 DHX15O43143 795 aaKnown RBP12.55□□□□□ -0.4
CPSF7-212ENST00000489728 LGR5O75473 907 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 ATG7O95352 703 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 LGALS2P05162 132 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 CLTBP09497 229 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■□□□□ 10
CPSF7-212ENST00000489728 GJB2P29033 226 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 TCF7P36402 384 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-212ENST00000489728 TRAPPC10P48553 1259 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 PSEN2P49810 448 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 SLC26A2P50443 739 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 TLE2Q04725 743 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 RDM1Q8NG50 284 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 KAT2BQ92831 832 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 TNPO1Q92973 898 aaKnown RBP12.55□□□□□ -0.4
CPSF7-212ENST00000489728 TUT1Q9H6E5 874 aaKnown RBP12.55□□□□□ -0.4
CPSF7-212ENST00000489728 PRKAG2Q9UGJ0 569 aa12.55□□□□□ -0.4
CPSF7-212ENST00000489728 DDX25Q9UHL0 483 aaKnown RBP12.55□□□□□ -0.4
CPSF7-212ENST00000489728 KIAA0355O15063 1070 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 MSH4O15457 936 aa12.54□□□□□ -0.4
CPSF7-212ENST00000489728 PQBP1O60828 265 aaKnown RBP12.54□□□□□ -0.4
CPSF7-212ENST00000489728 DTNBO60941 627 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms