RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 hCG_1984214I3L0E3 225 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
GABPA-203ENST00000487266 KCNA2P16389 499 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 EVCP57679 992 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 NEDD9Q14511 834 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 OTOP2Q7RTS6 562 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 DEFB128Q7Z7B8 93 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 ZNF713Q8N859 430 aaPredicted RBP18.16■□□□□ 0.5
GABPA-203ENST00000487266 C7orf31Q8N865 590 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 CYP2W1Q8TAV3 490 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 WNT8BQ93098 351 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 GPRASP2Q96D09 838 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 KATNAL1Q9BW62 490 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 SLC26A6Q9BXS9 759 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 UBIAD1Q9Y5Z9 338 aa18.16■□□□□ 0.5
GABPA-203ENST00000487266 PRPF3O43395 683 aaKnown RBP18.15■□□□□ 0.5
GABPA-203ENST00000487266 DTNBO60941 627 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 CLK2P49760 499 aaKnown RBP18.15■□□□□ 0.5
GABPA-203ENST00000487266 STK3Q13188 491 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 MTMR1Q13613 665 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 RASIP1Q5U651 963 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 JAKMIP3Q5VZ66 844 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 MTMR10Q9NXD2 777 aa18.15■□□□□ 0.5
GABPA-203ENST00000487266 EYSQ5T1H1 3165 aa18.14■□□□□ 0.49
GABPA-203ENST00000487266 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.49
GABPA-203ENST00000487266 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
GABPA-203ENST00000487266 RASGRP4Q8TDF6 673 aa18.14■□□□□ 0.49
GABPA-203ENST00000487266 GUCD1Q96NT3 240 aa18.14■□□□□ 0.49
GABPA-203ENST00000487266 JADE2Q9NQC1 790 aa18.14■□□□□ 0.49
GABPA-203ENST00000487266 PDRG1Q9NUG6 133 aa18.14■□□□□ 0.49
GABPA-203ENST00000487266 H3BRB1 525 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 SEC24BO95487 1268 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 IQCF3P0C7M6 154 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 PBX2P40425 430 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 ZNF697Q5TEC3 545 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 HERVK_113Q902F9 699 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 UIMC1Q96RL1 719 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 SENP7Q9BQF6 1050 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 TTYH1Q9H313 450 aaPredicted RBP18.13■□□□□ 0.49
GABPA-203ENST00000487266 TUT1Q9H6E5 874 aaKnown RBP18.13■□□□□ 0.49
GABPA-203ENST00000487266 EHMT1Q9H9B1 1298 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 PTPRSQ13332 1948 aa18.13■□□□□ 0.49
GABPA-203ENST00000487266 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 FGBP02675 491 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 SMIM10L2AP0DMW4 78 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 SMIM10L2BP0DMW5 78 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 ARP10275 920 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 IFNAR1P17181 557 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 SREBF1P36956 1147 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 AP3B2Q13367 1082 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 BFSP2Q13515 415 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 AIFM3Q96NN9 605 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 MXRA8Q9BRK3 442 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
GABPA-203ENST00000487266 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 KCNH7Q9NS40 1196 aa18.12■□□□□ 0.49
GABPA-203ENST00000487266 GSTTP1A0A1W2PQM5 241 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 FOSP01100 380 aaPredicted RBP18.11■□□□□ 0.49
GABPA-203ENST00000487266 DNAJB2P25686 324 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
GABPA-203ENST00000487266 ARHGAP4P98171 946 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
GABPA-203ENST00000487266 GPNMBQ14956 572 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
GABPA-203ENST00000487266 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 CDHR1Q96JP9 859 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 PBX4Q9BYU1 374 aa18.11■□□□□ 0.49
GABPA-203ENST00000487266 KAT6AQ92794 2004 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
GABPA-203ENST00000487266 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
GABPA-203ENST00000487266 ZBBXA8MT70 800 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 CKBP12277 381 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 MARK3P27448 753 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
GABPA-203ENST00000487266 CEP55Q53EZ4 464 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 LRRC8DQ7L1W4 858 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
GABPA-203ENST00000487266 CAGE1Q8TC20 777 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 ZNF274Q96GC6 653 aaPredicted RBP18.1■□□□□ 0.49
GABPA-203ENST00000487266 C6orf50Q9HD87 102 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
GABPA-203ENST00000487266 C17orf102A2RUQ5 167 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 TREHO43280 583 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 SELPP16109 830 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 HOXC8P31273 242 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 SCRN1Q12765 414 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 PTK7Q13308 1070 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 TCTN1Q2MV58 587 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 ZNF618Q5T7W0 954 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 TRAF7Q6Q0C0 670 aa18.09■□□□□ 0.49
GABPA-203ENST00000487266 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
GABPA-203ENST00000487266 CCDC155Q8N6L0 562 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms