RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 KCNC1P48547 511 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 ITGA1P56199 1179 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 CTSWP56202 376 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 NKX3-2P78367 333 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 FAM209AQ5JX71 171 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 LILRA6Q6PI73 481 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 OTOP3Q7RTS5 596 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 MAMDC2Q7Z304 686 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 CARFQ8N187 725 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 KYQ8NBH2 561 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 TOE1Q96GM8 510 aaKnown RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 EXOC2Q96KP1 924 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 C20orf173Q96LM9 149 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 SYT3Q9BQG1 590 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 ALG1Q9BT22 464 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 SPATA6Q9NWH7 488 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 NTMQ9P121 344 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 ASH2LQ9UBL3 628 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 TRAF6Q9Y4K3 522 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 ARAP1Q96P48 1450 aa7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 AQP7O14520 342 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 SOD2P04179 222 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 C6orf222P0C671 652 aaPredicted RBP7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 GNAT1P11488 350 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 THBS2P35442 1172 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 SPIRE1Q08AE8 756 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 TTLL7Q6ZT98 887 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 TTLL6Q8N841 843 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 PTPRN2Q92932 1015 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 SPATA25Q9BR10 227 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 RTEL1Q9NZ71 1219 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 MROH2BQ7Z745 1585 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 CADPSQ9ULU8 1353 aa7.07□□□□□ -1.28
SMARCC1-207ENST00000485833 FAM47E-STBD1D6RA91 191 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 SLC27A2O14975 620 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 ZC3H12BQ5HYM0 836 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 HABP4Q5JVS0 413 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 TEPPQ6URK8 271 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 TRIM48Q8IWZ4 208 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 TTLL11Q8NHH1 800 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 DNAJC2Q99543 621 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 KCNJ15Q99712 375 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 IPPKQ9H8X2 491 aa7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 URB2Q14146 1524 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-207ENST00000485833 CEP164Q9UPV0 1460 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 MTDHQ86UE4 582 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 STK32CQ86UX6 486 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 ZDHHC14Q8IZN3 488 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 DNAJC7Q99615 494 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 DHRS4Q9BTZ2 278 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 MRPS23Q9Y3D9 190 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 NUB1Q9Y5A7 615 aa7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 ZNF608Q9ULD9 1512 aaPredicted RBP7.05□□□□□ -1.28
SMARCC1-207ENST00000485833 LRG1P02750 347 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 COL6A2P12110 1019 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 GABREP78334 506 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 PAK1Q13153 545 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 ADAM9Q13443 819 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 FRMD5Q7Z6J6 570 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 KISS1RQ969F8 398 aaPredicted RBP7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 OSBPL2Q9H1P3 480 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 HSPBP1Q9NZL4 362 aa7.04□□□□□ -1.28
SMARCC1-207ENST00000485833 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 NKRFO15226 690 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 NAT1P18440 290 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 TUSC3Q13454 348 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 NFIXQ14938 502 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 PRR31Q5SQ13 230 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 NT5DC1Q5TFE4 455 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 JMYQ8N9B5 988 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 DSEQ9UL01 958 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 FANCD2Q9BXW9 1451 aa7.03□□□□□ -1.28
SMARCC1-207ENST00000485833 ARVCFO00192 962 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 WNT9AO14904 365 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 GRIN1Q05586 938 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 ZNF761Q86XN6 746 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 ZSWIM2Q8NEG5 633 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 ADAMTS17Q8TE56 1095 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 TEPSINQ96N21 525 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 TMEM209Q96SK2 561 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 PDGFDQ9GZP0 370 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 USP40Q9NVE5 1235 aa7.02□□□□□ -1.29
SMARCC1-207ENST00000485833 NOBOXO60393 691 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 LTFP02788 710 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 GJA9P57773 515 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 GUCY1A3Q02108 690 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 C2orf27AQ580R0 203 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 KCTD1Q719H9 257 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 RELTQ969Z4 430 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 ZSWIM3Q96MP5 696 aa7.01□□□□□ -1.29
SMARCC1-207ENST00000485833 CLIC6Q96NY7 704 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms