RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ITGA7Q13683 1181 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 MOXD1Q6UVY6 613 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 FAM126BQ8IXS8 530 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 CYP2W1Q8TAV3 490 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 TMX3Q96JJ7 454 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 SPATA33Q96N06 139 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 KCNJ14Q9UNX9 436 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 ALPK3Q96L96 1907 aa18.1■□□□□ 0.49
UPF3A-208ENST00000484246 ATP9AO75110 1047 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 MYL3P08590 195 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 PTPN11Q06124 597 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-208ENST00000484246 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 KAT2BQ92831 832 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 TNFRSF25Q93038 417 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 LENG9Q96B70 501 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 GPR20Q99678 358 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 KATNAL1Q9BW62 490 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 AGO4Q9HCK5 861 aaKnown RBP18.09■□□□□ 0.49
UPF3A-208ENST00000484246 PDLIM7Q9NR12 457 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
UPF3A-208ENST00000484246 CYP3A7-CYP3A51PA0A087WV96 503 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 HAS3O00219 553 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 CD4P01730 458 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 MMP1P03956 469 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 CYP3A7P24462 503 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.48
UPF3A-208ENST00000484246 CYFIP1Q7L576 1253 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 TBCKQ8TEA7 893 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 MBOAT7Q96N66 472 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 TBX21Q9UL17 535 aa18.08■□□□□ 0.48
UPF3A-208ENST00000484246 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
UPF3A-208ENST00000484246 KIAA0355O15063 1070 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
UPF3A-208ENST00000484246 CLTBP09497 229 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 ARP10275 920 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 KRT2P35908 639 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 ZNF76P36508 570 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 PSMC6P62333 389 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 PLA2G4DQ86XP0 818 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 VTI1AQ96AJ9 217 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 C16orf70Q9BSU1 422 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 BRMS1Q9HCU9 246 aa18.07■□□□□ 0.48
UPF3A-208ENST00000484246 JPH1Q9HDC5 661 aaPredicted RBP18.07■□□□□ 0.48
UPF3A-208ENST00000484246 SCN10AQ9Y5Y9 1956 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 DTNBO60941 627 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 LGALS2P05162 132 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 FAAP100Q0VG06 881 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 ITGB3BPQ13352 177 aaPredicted RBP18.06■□□□□ 0.48
UPF3A-208ENST00000484246 TRIM29Q14134 588 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 KRT40Q6A162 431 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 OXER1Q8TDS5 423 aa18.06■□□□□ 0.48
UPF3A-208ENST00000484246 CCDC194A0A1B0GVG4 234 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 IPO5O00410 1097 aaKnown RBP18.05■□□□□ 0.48
UPF3A-208ENST00000484246 TLR3O15455 904 aaKnown RBP18.05■□□□□ 0.48
UPF3A-208ENST00000484246 ZNF286BP0CG31 522 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 GCFC2P16383 781 aaKnown RBP18.05■□□□□ 0.48
UPF3A-208ENST00000484246 PSEN2P49810 448 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 NBPF20Q3BBV1 942 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 Q4G0T1 1027 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 FBXO18Q8NFZ0 1043 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 SLC9A2Q9UBY0 812 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
UPF3A-208ENST00000484246 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
UPF3A-208ENST00000484246 EMSYQ7Z589 1322 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 DHX15O43143 795 aaKnown RBP18.04■□□□□ 0.48
UPF3A-208ENST00000484246 HOXC8P31273 242 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 CUL4AQ13619 759 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 MFSD10Q14728 455 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 PRR16Q569H4 304 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 PPP4R3AQ6IN85 833 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 DIS3L2Q8IYB7 885 aaKnown RBP18.04■□□□□ 0.48
UPF3A-208ENST00000484246 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
UPF3A-208ENST00000484246 TBC1D22BQ9NU19 505 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
UPF3A-208ENST00000484246 GSTTP1A0A1W2PQM5 241 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 TRIM43BA6NCK2 446 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 SORBS3O60504 671 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 B4GALT4O60513 344 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 LGR5O75473 907 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 ATG7O95352 703 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 NR5A1Q13285 461 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 INF2Q27J81 1249 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 FAM184AQ8NB25 1140 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 TRIM43Q96BQ3 446 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-208ENST00000484246 RIT2Q99578 217 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 GDF15Q99988 308 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 ZNF577Q9BSK1 485 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 GTF2IRD1Q9UHL9 959 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 ZNF215Q9UL58 517 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms