RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 PCNX4Q63HM2 1172 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 XIRP2A4UGR9 3374 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 KAT6AQ92794 2004 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 HOXC8P31273 242 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 MRPS5P82675 430 aaKnown RBP22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 ZNF200P98182 395 aaPredicted RBP22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 IKBKEQ14164 716 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 CREB3L3Q68CJ9 461 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 TRAF7Q6Q0C0 670 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 USP17L6PQ6QN14 398 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 MICALL1Q8N3F8 863 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 WNT8BQ93098 351 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 ASB2Q96Q27 587 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 SENP7Q9BQF6 1050 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 ZBED2Q9BTP6 218 aa22.44■■□□□ 1.18
R3HDM1-215ENST00000483021 BDP1A6H8Y1 2624 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 MEIS2O14770 477 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 PLEKHA8P1O95397 391 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 SEMA3FQ13275 785 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 NECTIN1Q15223 517 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 CYFIP1Q7L576 1253 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 NLRX1Q86UT6 975 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 SRBD1Q8N5C6 995 aaKnown RBP22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 GIMAP8Q8ND71 665 aaPredicted RBP22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 IL27Q8NEV9 243 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 ARNTL2Q8WYA1 636 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 ATP6V0A1Q93050 837 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 CERS4Q9HA82 394 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 RTEL1Q9NZ71 1219 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 SLC12A7Q9Y666 1083 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 SIP14410 1827 aa22.43■■□□□ 1.18
R3HDM1-215ENST00000483021 CAND2O75155 1236 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 LGR5O75473 907 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 SMIM10L2AP0DMW4 78 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 SMIM10L2BP0DMW5 78 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 GNAT1P11488 350 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 THPOP40225 353 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 DEFB103AP81534 67 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 HIC1Q14526 733 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 RNF20Q5VTR2 975 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 GPR20Q99678 358 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 MTCH2Q9Y6C9 303 aa22.42■■□□□ 1.18
R3HDM1-215ENST00000483021 RSPH10B2B2RC85 870 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 GJB5O95377 273 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 RSPH10BP0C881 870 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 RXRAP19793 462 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 MBTPS1Q14703 1052 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 BMP2KLQ5H9B9 411 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 CDHR1Q96JP9 859 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 BCAS3Q9H6U6 928 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 PSTPIP2Q9H939 334 aa22.41■■□□□ 1.18
R3HDM1-215ENST00000483021 EPOPA6NHQ4 379 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 RFXAPO00287 272 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 ARHGEF15O94989 841 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 SGMS1Q86VZ5 419 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 GPRASP2Q96D09 838 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 RAD9AQ99638 391 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 RNPEPQ9H4A4 650 aa22.4■■□□□ 1.18
R3HDM1-215ENST00000483021 TNFRSF10AO00220 468 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 AAK1Q2M2I8 961 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 TCTN1Q2MV58 587 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 SYNE3Q6ZMZ3 975 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 TMTC3Q6ZXV5 915 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 CMTR1Q8N1G2 835 aaKnown RBP22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 FANCBQ8NB91 859 aa22.39■■□□□ 1.17
R3HDM1-215ENST00000483021 LCHNA4D1U4 455 aa22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 SPDYE3A6NKU9 549 aa22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 TREHO43280 583 aa22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 SKIV2LQ15477 1246 aaKnown RBP22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 TMCO2Q7Z6W1 182 aaPredicted RBP22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 MICU3Q86XE3 530 aa22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 ADAMTS19Q8TE59 1207 aa22.38■■□□□ 1.17
R3HDM1-215ENST00000483021 AMHP03971 560 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 SP4Q02446 784 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 GRB10Q13322 594 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 COL9A3Q14050 684 aaPredicted RBP22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 PLEKHG4Q58EX7 1191 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 UTP14CQ5TAP6 766 aaKnown RBP22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 CENPQQ7L2Z9 268 aaPredicted RBP22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 TRIM50Q86XT4 487 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 TEX2Q8IWB9 1127 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 DBF4BQ8NFT6 615 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 LRRC2Q9BYS8 371 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 EHMT1Q9H9B1 1298 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 SETD4Q9NVD3 440 aa22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 RBM28Q9NW13 759 aaKnown RBP22.37■■□□□ 1.17
R3HDM1-215ENST00000483021 NRCAMQ92823 1304 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 RAB11FIP4Q86YS3 637 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 CCDC82Q8N4S0 544 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 SEPT8Q92599 483 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 NEK1Q96PY6 1258 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 TGS1Q96RS0 853 aaKnown RBP22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 LMCD1Q9NZU5 365 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 COG5Q9UP83 839 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 INSL6Q9Y581 213 aa22.36■■□□□ 1.17
R3HDM1-215ENST00000483021 MAFGO15525 162 aa22.35■■□□□ 1.17
R3HDM1-215ENST00000483021 KCNA2P16389 499 aa22.35■■□□□ 1.17
R3HDM1-215ENST00000483021 TCF7P36402 384 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms