RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 FAM184BQ9ULE4 1060 aa17.65■□□□□ 0.42
MMP11-208ENST00000477567 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
MMP11-208ENST00000477567 Q9Y3F1 56 aa17.65■□□□□ 0.42
MMP11-208ENST00000477567 ADCY6O43306 1168 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
MMP11-208ENST00000477567 SMPD1P17405 629 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 FOXD4L6Q3SYB3 417 aaPredicted RBP17.64■□□□□ 0.41
MMP11-208ENST00000477567 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 FOXD4L3Q6VB84 417 aaPredicted RBP17.64■□□□□ 0.41
MMP11-208ENST00000477567 SH3TC2Q8TF17 1288 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 EMID1Q96A84 441 aaPredicted RBP17.64■□□□□ 0.41
MMP11-208ENST00000477567 ARMC5Q96C12 935 aa17.64■□□□□ 0.41
MMP11-208ENST00000477567 KIAA0100Q14667 2235 aaKnown RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 CCND3P30281 292 aaPredicted RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 NKX3-2P78367 333 aa17.63■□□□□ 0.41
MMP11-208ENST00000477567 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
MMP11-208ENST00000477567 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 TMEM63BQ5T3F8 832 aa17.63■□□□□ 0.41
MMP11-208ENST00000477567 METTL7BQ6UX53 244 aa17.63■□□□□ 0.41
MMP11-208ENST00000477567 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
MMP11-208ENST00000477567 SCAND2PQ9GZW5 306 aaPredicted RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 HMX1Q9NP08 348 aaPredicted RBP17.63■□□□□ 0.41
MMP11-208ENST00000477567 MSCO60682 206 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 GAS7O60861 476 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 PPP6R2O75170 966 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 DUSP11O75319 330 aaKnown RBP17.62■□□□□ 0.41
MMP11-208ENST00000477567 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
MMP11-208ENST00000477567 GH1P01241 217 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 RGS19P49795 217 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 FXR2P51116 673 aaKnown RBP eCLIP17.62■□□□□ 0.41
MMP11-208ENST00000477567 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
MMP11-208ENST00000477567 ARHGAP1Q07960 439 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 SPIRE1Q08AE8 756 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 PPP2R5CQ13362 524 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 LRCH2Q5VUJ6 765 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 CHAMP1Q96JM3 812 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 TTC12Q9H892 705 aaPredicted RBP17.62■□□□□ 0.41
MMP11-208ENST00000477567 VAV3Q9UKW4 847 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 PCDHA12Q9UN75 941 aa17.62■□□□□ 0.41
MMP11-208ENST00000477567 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 SPTLC2O15270 562 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 GGPS1O95749 300 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 TXKP42681 527 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 PDIA5Q14554 519 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 STK38Q15208 465 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 IL17AQ16552 155 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 KCNG4Q8TDN1 519 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 COPS5Q92905 334 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 GJA10Q969M2 543 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 ZNF333Q96JL9 665 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 TEKT3Q9BXF9 490 aa17.61■□□□□ 0.41
MMP11-208ENST00000477567 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
MMP11-208ENST00000477567 PAK6Q9NQU5 681 aaPredicted RBP17.61■□□□□ 0.41
MMP11-208ENST00000477567 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
MMP11-208ENST00000477567 MARCH6O60337 910 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 CNGA1P29973 690 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 KRT76Q01546 638 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 GJC2Q5T442 439 aaPredicted RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 DTHD1Q6ZMT9 781 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 DHX37Q8IY37 1157 aaKnown RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 IGSF22Q8N9C0 903 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 SLC9A2Q9UBY0 812 aa17.6■□□□□ 0.41
MMP11-208ENST00000477567 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 FBXO2Q9UK22 296 aaPredicted RBP17.6■□□□□ 0.41
MMP11-208ENST00000477567 PDE4DIPQ5VU43 2346 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 ELP1O95163 1332 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 ATG7O95352 703 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 CCNE2O96020 404 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 RARBP10826 455 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
MMP11-208ENST00000477567 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
MMP11-208ENST00000477567 GJA9P57773 515 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 TMEM266Q2M3C6 531 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 LHX8Q68G74 356 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 SMAP1Q8IYB5 467 aaPredicted RBP17.59■□□□□ 0.41
MMP11-208ENST00000477567 RDM1Q8NG50 284 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 PPTC7Q8NI37 304 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 UIMC1Q96RL1 719 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.59■□□□□ 0.41
MMP11-208ENST00000477567 UNC93B1Q9H1C4 597 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 MLXIPQ9HAP2 919 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
MMP11-208ENST00000477567 A6NJR5 290 aa17.58■□□□□ 0.4
MMP11-208ENST00000477567 CTAGE5O15320 804 aa17.58■□□□□ 0.4
MMP11-208ENST00000477567 PTGS1P23219 599 aa17.58■□□□□ 0.4
MMP11-208ENST00000477567 MARCKSP29966 332 aaPredicted RBP17.58■□□□□ 0.4
MMP11-208ENST00000477567 SFNP31947 248 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms