RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 GDF6Q6KF10 455 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-221ENST00000477561 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 XRRA1Q6P2D8 792 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 ZNF365Q70YC5 407 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 C7orf31Q8N865 590 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 CYP2W1Q8TAV3 490 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 ANO3Q9BYT9 981 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 WNT8AQ9H1J5 351 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 HDAC6Q9UBN7 1215 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 UBIAD1Q9Y5Z9 338 aa9.47□□□□□ -0.89
HDAC6-221ENST00000477561 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 HAS3O00219 553 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 CPLX1O14810 134 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 F2P00734 622 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 LGALS2P05162 132 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-221ENST00000477561 IFNAR1P17181 557 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
HDAC6-221ENST00000477561 MTMR1Q13613 665 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 HIC1Q14526 733 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 METTL7BQ6UX53 244 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-221ENST00000477561 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 GPRASP2Q96D09 838 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF274Q96GC6 653 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-221ENST00000477561 FAM161BQ96MY7 647 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 GPR20Q99678 358 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 C16orf70Q9BSU1 422 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 KATNAL1Q9BW62 490 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 C6orf50Q9HD87 102 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 IL23AQ9NPF7 189 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 JADE2Q9NQC1 790 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 GTF2IRD1Q9UHL9 959 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 MYH7BA7E2Y1 1941 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 NID2Q14112 1375 aa9.46□□□□□ -0.9
HDAC6-221ENST00000477561 LAMA2P24043 3122 aaKnown RBP9.46□□□□□ -0.9
HDAC6-221ENST00000477561 SCN10AQ9Y5Y9 1956 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 GRXCR1A8MXD5 290 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 H3BRB1 525 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 FGBP02675 491 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 ARP10275 920 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 KCNA2P16389 499 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF76P36508 570 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 BECN1Q14457 450 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 OTOP2Q7RTS6 562 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 DEFB123Q8N688 67 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 IL27Q8NEV9 243 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 SENP7Q9BQF6 1050 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 MXRA8Q9BRK3 442 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 RNF26Q9BY78 433 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 ZMYND12Q9H0C1 365 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
HDAC6-221ENST00000477561 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-221ENST00000477561 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 TCF7P36402 384 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SREBF1P36956 1147 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 AK2P54819 239 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 ANAPC15P60006 121 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 ARHGAP4P98171 946 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SCRN1Q12765 414 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 AP3B2Q13367 1082 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 BFSP2Q13515 415 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 CEP55Q53EZ4 464 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 PSRC1Q6PGN9 363 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SESTD1Q86VW0 696 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 TRIM22Q8IYM9 498 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 GIMAP8Q8ND71 665 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 CCDC12Q8WUD4 166 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 WNT8BQ93098 351 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 GLT8D2Q9H1C3 349 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 RNPEPQ9H4A4 650 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 SETD4Q9NVD3 440 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-221ENST00000477561 TPCN1Q9ULQ1 816 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 DOCK5Q9H7D0 1870 aa9.44□□□□□ -0.9
HDAC6-221ENST00000477561 ESYT2A0FGR8 921 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 C17orf102A2RUQ5 167 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms