RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CKBP12277 381 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 ACTN1P12814 892 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
USF1-204ENST00000472217 HSPA4P34932 840 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 RABGGTBP53611 331 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 NAPAP54920 295 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 SP4Q02446 784 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 PTK7Q13308 1070 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 GPNMBQ14956 572 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 TRIM71Q2Q1W2 868 aaKnown RBP10.36□□□□□ -0.75
USF1-204ENST00000472217 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 NLRX1Q86UT6 975 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 TRIM50Q86XT4 487 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 GPRASP2Q96D09 838 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 JAKMIP1Q96N16 626 aaKnown RBP10.36□□□□□ -0.75
USF1-204ENST00000472217 GPR20Q99678 358 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 SENP7Q9BQF6 1050 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
USF1-204ENST00000472217 NAP1L2Q9ULW6 460 aaPredicted RBP10.36□□□□□ -0.75
USF1-204ENST00000472217 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 STXBP3O00186 592 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 NBNO60934 754 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 REC8O95072 547 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 NEFLP07196 543 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 SMIM10L2AP0DMW4 78 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 SMIM10L2BP0DMW5 78 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 MYOGP15173 224 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 KCNA2P16389 499 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 ITGB5P18084 799 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 HOXC8P31273 242 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 RCAN1P53805 252 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 FGD1P98174 961 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 ZNF618Q5T7W0 954 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 Q6ZUG5 572 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.35□□□□□ -0.75
USF1-204ENST00000472217 BRF1Q92994 677 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 PRDM12Q9H4Q4 367 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 SLC28A3Q9HAS3 691 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 RIC8AQ9NPQ8 531 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 PCDHA11Q9Y5I1 949 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 UBIAD1Q9Y5Z9 338 aa10.35□□□□□ -0.75
USF1-204ENST00000472217 V9GY48 417 aaPredicted RBP10.35□□□□□ -0.75
USF1-204ENST00000472217 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 C17orf102A2RUQ5 167 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 hCG_1984214I3L0E3 225 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 ATP9AO75110 1047 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 BAIAP3O94812 1187 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 PARNO95453 639 aaKnown RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 CXCL10P02778 98 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 RPS6KB1P23443 525 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 TCF7P36402 384 aaPredicted RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 METAP2P50579 478 aaKnown RBP eCLIP10.34□□□□□ -0.75
USF1-204ENST00000472217 MTMR1Q13613 665 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 UTP14CQ5TAP6 766 aaKnown RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 TRAF7Q6Q0C0 670 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 BLOC1S2Q6QNY1 142 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 SERINC5Q86VE9 423 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 ZNF713Q8N859 430 aaPredicted RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 GIMAP8Q8ND71 665 aaPredicted RBP10.34□□□□□ -0.75
USF1-204ENST00000472217 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 CDHR1Q96JP9 859 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 SLC9A7Q96T83 725 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 AGXT2Q9BYV1 514 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 BARHL2Q9NY43 387 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 NID2Q14112 1375 aa10.34□□□□□ -0.75
USF1-204ENST00000472217 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
USF1-204ENST00000472217 COL6A3P12111 3177 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 TREHO43280 583 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 CA3P07451 260 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 THPOP40225 353 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 ADCY7P51828 1080 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 WDR5P61964 334 aaKnown RBP10.33□□□□□ -0.76
USF1-204ENST00000472217 MBTPS1Q14703 1052 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 TCTN1Q2MV58 587 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 CNKSR3Q6P9H4 555 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 HERC6Q8IVU3 1022 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 FBXL16Q8N461 479 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 GAS2L1Q99501 681 aaPredicted RBP10.33□□□□□ -0.76
USF1-204ENST00000472217 ANO3Q9BYT9 981 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 SETD4Q9NVD3 440 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 TMEM260Q9NX78 707 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 ZNF215Q9UL58 517 aaPredicted RBP10.33□□□□□ -0.76
USF1-204ENST00000472217 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
USF1-204ENST00000472217 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 GSTTP1A0A1W2PQM5 241 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms