RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 EDAQ92838 391 aa22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 PBXIP1Q96AQ6 731 aa22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 C16orf70Q9BSU1 422 aa22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 LMAN2LQ9H0V9 348 aa22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 RNF41Q9H4P4 317 aaPredicted RBP22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 TUT1Q9H6E5 874 aaKnown RBP22.09■■□□□ 1.13
NCKIPSD-209ENST00000470006 GRM6O15303 877 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 RB1P06400 928 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 PCP11498 1178 aaKnown RBP22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 SMAD4Q13485 552 aaKnown RBP22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 DGKHQ86XP1 1220 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 APBB2Q92870 758 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 OSBPL7Q9BZF2 842 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 RNPEPQ9H4A4 650 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 CD207Q9UJ71 328 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 RWDD3Q9Y3V2 267 aa22.08■■□□□ 1.13
NCKIPSD-209ENST00000470006 CCDC171Q6TFL3 1326 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 A0A0D9SFI3 127 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 NOP56O00567 594 aaKnown RBP22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 GNAT1P11488 350 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 BMPR1AP36894 532 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 CTC1Q2NKJ3 1217 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 ASPRV1Q53RT3 343 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 IQCA1Q86XH1 822 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 TBC1D10CQ8IV04 446 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 SUGP1Q8IWZ8 645 aaKnown RBP22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 PRSS33Q8NF86 280 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 ZFP91Q96JP5 570 aaPredicted RBP22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 PDCD2LQ9BRP1 358 aa22.07■■□□□ 1.12
NCKIPSD-209ENST00000470006 TECTAO75443 2155 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 TMEM221A6NGB7 291 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 TRIM6-TRIM34B2RNG4 842 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 M0R296 226 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 CAND2O75155 1236 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 PARP1P09874 1014 aaKnown RBP22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 UBA1P22314 1058 aaKnown RBP22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 GTF2F1P35269 517 aaKnown RBP eCLIP22.06■■□□□ 1.122e-6■■■■□ 23.4
NCKIPSD-209ENST00000470006 NDUFV1P49821 464 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 SP2Q02086 613 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 CCDC178Q5BJE1 867 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 IER5LQ5T953 404 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 JMJD4Q9H9V9 463 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 SETD4Q9NVD3 440 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 ATG2AQ2TAZ0 1938 aa22.06■■□□□ 1.12
NCKIPSD-209ENST00000470006 ST18O60284 1047 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 RGS20O76081 388 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 LGALS2P05162 132 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 HOXA13P31271 388 aaPredicted RBP22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 AMNQ9BXJ7 453 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 ZMYM6O95789 1325 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 NEDD4P46934 1319 aa22.05■■□□□ 1.12
NCKIPSD-209ENST00000470006 C5orf67F2Z3F1 127 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 LINC01565O15544 149 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 TBX10O75333 385 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 TGFB3P10600 412 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 CCND2P30279 289 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 HSD17B4P51659 736 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 BTG3Q14201 252 aaPredicted RBP22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 PGM5Q15124 567 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 TRIM67Q6ZTA4 783 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 ZNF589Q86UQ0 364 aaPredicted RBP22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 VSIG10LQ86VR7 867 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 PPP2R3CQ969Q6 453 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 PRRX2Q99811 253 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 ALG13Q9NP73 1137 aaKnown RBP22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 COL4A6Q14031 1691 aa22.04■■□□□ 1.12
NCKIPSD-209ENST00000470006 KAT6AQ92794 2004 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 ZNF213O14771 459 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 KDM4AO75164 1064 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 ARHGAP4P98171 946 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 NMIQ13287 307 aaPredicted RBP22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 PKN1Q16512 942 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 GPKOWQ92917 476 aaPredicted RBP eCLIP22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 USP26Q9BXU7 913 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 ADGRA3Q8IWK6 1321 aa22.03■■□□□ 1.12
NCKIPSD-209ENST00000470006 ANKRD45Q5TZF3 282 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 STOX1Q6ZVD7 989 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 BMP8AQ7Z5Y6 402 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 FCHSD1Q86WN1 690 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 IL31RAQ8NI17 732 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 PCDHA1Q9Y5I3 950 aa22.02■■□□□ 1.12
NCKIPSD-209ENST00000470006 GHRP10912 638 aa22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 HOXC8P31273 242 aa22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 ADAM15Q13444 863 aa22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 UTP14CQ5TAP6 766 aaKnown RBP22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZSCAN10Q96SZ4 725 aaPredicted RBP22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 BCAS3Q9H6U6 928 aa22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 MAP3K20Q9NYL2 800 aaKnown RBP22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZNF215Q9UL58 517 aaPredicted RBP22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 USP34Q70CQ2 3546 aa22.01■■□□□ 1.11
NCKIPSD-209ENST00000470006 OPLAHO14841 1288 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 MMP1P03956 469 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 GNPTABQ3T906 1256 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 CYFIP1Q7L576 1253 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 FAM86C1Q9NVL1 165 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
NCKIPSD-209ENST00000470006 B4E1Z4 1266 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 GCOM1H8Y6P7 765 aaPredicted RBP21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 GFRA3O60609 400 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 POLR2MP0CAP2 368 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms