RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 BEND6Q5SZJ8 279 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-221ENST00000469415 NFRKBQ6P4R8 1299 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 SIAH1Q8IUQ4 282 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 KSR1Q8IVT5 923 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 GUF1Q8N442 669 aaKnown RBP19.75■□□□□ 0.75
MCF2L-221ENST00000469415 NUP58Q9BVL2 599 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 PCDHA13Q9Y5I0 950 aa19.75■□□□□ 0.75
MCF2L-221ENST00000469415 CLIC2O15247 247 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 RAD17O75943 681 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 LMAN1P49257 510 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 PLS1Q14651 629 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 DCAF17Q5H9S7 520 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-221ENST00000469415 LRRC55Q6ZSA7 311 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 CDAN1Q8IWY9 1227 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 RIN2Q8WYP3 895 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-221ENST00000469415 CSRNP1Q96S65 589 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 PI4KBQ9UBF8 816 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 SALL4Q9UJQ4 1053 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 PACSIN2Q9UNF0 486 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-221ENST00000469415 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 PDIA5Q14554 519 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 WHAMMP3Q1A5X7 153 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 MAEAQ7L5Y9 396 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 COL24A1Q17RW2 1714 aa19.74■□□□□ 0.75
MCF2L-221ENST00000469415 FAM86B1E9PN63 330 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 FAM86B2P0C5J1 330 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 KCNA1Q09470 495 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 ADAM9Q13443 819 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 PAXIP1Q6ZW49 1069 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-221ENST00000469415 MASTLQ96GX5 879 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 VEZTQ9HBM0 779 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 SIK3Q9Y2K2 1263 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-221ENST00000469415 PVALEFA0A1B0GWK0 134 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 SMARCA1P28370 1054 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 TBC1D10BQ4KMP7 808 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-221ENST00000469415 TRAPPC11Q7Z392 1133 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 CATSPER3Q86XQ3 398 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 GOLPH3Q9H4A6 298 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 EMILIN3Q9NT22 766 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 A0A1W2PRG0 241 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 MEIS2O14770 477 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 C21orf2O43822 256 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 PDE6BP35913 854 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 KCNMA1Q12791 1236 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 CTTNQ14247 550 aaKnown RBP19.73■□□□□ 0.75
MCF2L-221ENST00000469415 MEA1Q16626 185 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 ACER1Q8TDN7 264 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 ERGIC2Q96RQ1 377 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 BHMT2Q9H2M3 363 aa19.73■□□□□ 0.75
MCF2L-221ENST00000469415 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.73■□□□□ 0.75
MCF2L-221ENST00000469415 PPP4R3AQ6IN85 833 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 FBXO11Q86XK2 927 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 HDAC7Q8WUI4 952 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 SH2D3AQ9BRG2 576 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.75
MCF2L-221ENST00000469415 COL4A3BPQ9Y5P4 624 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 DDX39AO00148 427 aaKnown RBP19.72■□□□□ 0.75
MCF2L-221ENST00000469415 ERLIN1O75477 346 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 CYP11B2P19099 503 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 FKBP3Q00688 224 aaKnown RBP19.72■□□□□ 0.75
MCF2L-221ENST00000469415 TMEM119Q4V9L6 283 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 MS4A14Q96JA4 679 aa19.72■□□□□ 0.75
MCF2L-221ENST00000469415 EIF3CLB5ME19 914 aaKnown RBP19.71■□□□□ 0.75
MCF2L-221ENST00000469415 NOVP48745 357 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 CLK2P49760 499 aaKnown RBP19.71■□□□□ 0.75
MCF2L-221ENST00000469415 VAV2P52735 878 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 CASP8Q14790 479 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 BRD3Q15059 726 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 SFR1Q86XK3 245 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 CCDC65Q8IXS2 484 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 SCFD1Q8WVM8 642 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
MCF2L-221ENST00000469415 ADAMTS1Q9UHI8 967 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 LRRIQ3A6PVS8 624 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-221ENST00000469415 H0YIN7 160 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 MYBL2P10244 700 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 PLAGL2Q9UPG8 496 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 FAN1Q9Y2M0 1017 aa19.71■□□□□ 0.75
MCF2L-221ENST00000469415 PSMD14O00487 310 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 USO1O60763 962 aaKnown RBP19.7■□□□□ 0.74
MCF2L-221ENST00000469415 FTCDO95954 541 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 NR2F2P24468 414 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 ARSHQ5FYA8 562 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 TPH2Q8IWU9 490 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 AMNQ9BXJ7 453 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 PCDHB13Q9Y5F0 798 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 ONECUT3O60422 494 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-221ENST00000469415 MYBP10242 640 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 PROCA1Q8NCQ7 364 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-221ENST00000469415 MYO1AQ9UBC5 1043 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-221ENST00000469415 POLD1P28340 1107 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 DACT2Q5SW24 774 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 FAM83BQ5T0W9 1011 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 HDXQ7Z353 690 aa19.7■□□□□ 0.74
MCF2L-221ENST00000469415 CCDC17Q96LX7 622 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms