RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 POTECB2RU33 542 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 F5H6K3 240 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 PECAM1P16284 738 aaPredicted RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 KLRC3Q07444 240 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 C16orf86Q6ZW13 317 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 WDR24Q96S15 920 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 CHP1Q99653 195 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 OSBPL5Q9H0X9 879 aaPredicted RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 ABCB6Q9NP58 842 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 TUBGCP6Q96RT7 1819 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 IKBKBO14920 756 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 POTEAQ6S8J7 498 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 DNAAF5Q86Y56 855 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 CUL5Q93034 780 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 INTS13Q9NVM9 706 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 KIF5CO60282 957 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 NPY5RQ15761 445 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 NSMFQ6X4W1 530 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 MTRQ99707 1265 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 YIPF3Q9GZM5 350 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
USP11-206ENST00000469080 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 MAFGO15525 162 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
USP11-206ENST00000469080 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 MYLK4Q86YV6 388 aaPredicted RBP13.57□□□□□ -0.24
USP11-206ENST00000469080 JMJD4Q9H9V9 463 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 AKR1B10O60218 316 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 RTN2O75298 545 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 ZMYND10O75800 440 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 ABL1P00519 1130 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 CCDC175P0C221 793 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 ENOX1Q8TC92 643 aaKnown RBP13.57□□□□□ -0.24
USP11-206ENST00000469080 MED15Q96RN5 788 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 JADE2Q9NQC1 790 aa13.57□□□□□ -0.24
USP11-206ENST00000469080 TMCO5BA8MYB1 307 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 CLIC2O15247 247 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 CASP8Q14790 479 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 GSDMAQ96QA5 445 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 EHD4Q9H223 541 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 ADRA2BP18089 450 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 APBA1Q02410 837 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
USP11-206ENST00000469080 ALAS1P13196 640 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
USP11-206ENST00000469080 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
USP11-206ENST00000469080 TUBB4AP04350 444 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 AMPD3Q01432 767 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 BEND6Q5SZJ8 279 aaPredicted RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 RSRC1Q96IZ7 334 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 CNOT6LQ96LI5 555 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 TUBGCP2Q9BSJ2 902 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 ARL10Q8N8L6 244 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 HSD3B7Q9H2F3 369 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 MRPL44Q9H9J2 332 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 CENPFP49454 3210 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 GLI3P10071 1580 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 MDM2Q00987 491 aaPredicted RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 LLGL1Q15334 1064 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 CCDC122Q5T0U0 273 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 LARP4BQ92615 738 aaKnown RBP13.55□□□□□ -0.24
USP11-206ENST00000469080 DDX12PQ92771 950 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 IMPACTQ9P2X3 320 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
USP11-206ENST00000469080 NKRFO15226 690 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP11-206ENST00000469080 CXCR5P32302 372 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 SHMT1P34896 483 aa13.54□□□□□ -0.24
USP11-206ENST00000469080 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms