RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 SLFN12Q8IYM2 578 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 U2AF1L4Q8WU68 220 aaKnown RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 COPS5Q92905 334 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 SDF4Q9BRK5 362 aa18.11■□□□□ 0.49
GPC1-207ENST00000466624 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
GPC1-207ENST00000466624 WDR81Q562E7 1941 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 A6NJR5 290 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 LAD1O00515 517 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 DYNC1LI2O43237 492 aaPredicted RBP18.1■□□□□ 0.49
GPC1-207ENST00000466624 MCM7P33993 719 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 CPT1AP50416 773 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 ANO1Q5XXA6 986 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 RNF180Q86T96 592 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 TNS4Q8IZW8 715 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 ARRDC4Q8NCT1 418 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 KLHDC9Q8NEP7 349 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 PPTC7Q8NI37 304 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 JPH1Q9HDC5 661 aaPredicted RBP18.1■□□□□ 0.49
GPC1-207ENST00000466624 ZDHHC9Q9Y397 364 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
GPC1-207ENST00000466624 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 CTAGE5O15320 804 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 PSMD10O75832 226 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
GPC1-207ENST00000466624 BMP15O95972 392 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 HOXD8P13378 290 aaPredicted RBP18.09■□□□□ 0.49
GPC1-207ENST00000466624 ZNF174Q15697 407 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 CALCRLQ16602 461 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
GPC1-207ENST00000466624 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 HAS1Q92839 578 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 MTMR9Q96QG7 549 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 SLC9A2Q9UBY0 812 aa18.09■□□□□ 0.49
GPC1-207ENST00000466624 PGK1P00558 417 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 C6orf222P0C671 652 aaPredicted RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 KRT76Q01546 638 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 NBR1Q14596 966 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 LRRC41Q15345 812 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 FSCN1Q16658 493 aaKnown RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 ATL3Q6DD88 541 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 CCSAPQ6IQ19 270 aaPredicted RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 ZNF746Q6NUN9 644 aaPredicted RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 C4orf32Q8N8J7 132 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 PCSK9Q8NBP7 692 aaKnown RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 SPATA33Q96N06 139 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 TSEN34Q9BSV6 310 aaKnown RBP18.08■□□□□ 0.48
GPC1-207ENST00000466624 TEKT3Q9BXF9 490 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 PKD2L1Q9P0L9 805 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 TCEAL9Q9UHQ7 104 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 ATP6V1DQ9Y5K8 247 aa18.08■□□□□ 0.48
GPC1-207ENST00000466624 ELP1O95163 1332 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 DNM1LO00429 736 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 ZEB2O60315 1214 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 KPNA6O60684 536 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 GAS7O60861 476 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 TFRCP02786 760 aaKnown RBP18.07■□□□□ 0.48
GPC1-207ENST00000466624 MMP3P08254 477 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 OR52Z1P0C646 297 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 PTGS1P23219 599 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 PRPHP41219 470 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 ATP2C1P98194 919 aaPredicted RBP18.07■□□□□ 0.48
GPC1-207ENST00000466624 HSDL1Q3SXM5 330 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 B3GNT9Q6UX72 402 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
GPC1-207ENST00000466624 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 ZNF396Q96N95 335 aaPredicted RBP18.07■□□□□ 0.48
GPC1-207ENST00000466624 GPR20Q99678 358 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
GPC1-207ENST00000466624 MORC2Q9Y6X9 1032 aaPredicted RBP18.07■□□□□ 0.48
GPC1-207ENST00000466624 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
GPC1-207ENST00000466624 MARCH6O60337 910 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 PPFIA4O75335 1185 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 ATG7O95352 703 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 PTGDRQ13258 359 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 PPP2R5CQ13362 524 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 DGKDQ16760 1214 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 FOXD4L5Q5VV16 416 aaPredicted RBP18.06■□□□□ 0.48
GPC1-207ENST00000466624 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 RDM1Q8NG50 284 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 FOXD4L4Q8WXT5 416 aaPredicted RBP18.06■□□□□ 0.48
GPC1-207ENST00000466624 SEPT1Q8WYJ6 367 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 POLR3EQ9NVU0 708 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 VAV3Q9UKW4 847 aa18.06■□□□□ 0.48
GPC1-207ENST00000466624 MYH9P35579 1960 aaKnown RBP18.06■□□□□ 0.48
GPC1-207ENST00000466624 SCN10AQ9Y5Y9 1956 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 KBTBD13C9JR72 458 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 CCNE2O96020 404 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 SFNP31947 248 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 NASPP49321 788 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms