RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 KRT23Q9C075 422 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 CNNM2Q9H8M5 875 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 PCDHA1Q9Y5I3 950 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 KLRF2D3W0D1 207 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 H3BNC9 293 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 H3BQ06 376 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-220ENST00000464800 H3BRB1 525 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 LGALS2P05162 132 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 CTSHP09668 335 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
MCF2L-220ENST00000464800 SP2Q02086 613 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 GPM6BQ13491 265 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 TOP1MTQ969P6 601 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 DSCC1Q9BVC3 393 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
MCF2L-220ENST00000464800 FAM50BQ9Y247 325 aa16.96■□□□□ 0.31
MCF2L-220ENST00000464800 NOP56O00567 594 aaKnown RBP16.95■□□□□ 0.3
MCF2L-220ENST00000464800 TREHO43280 583 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 UPP2O95045 317 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 TCEAL5Q5H9L2 206 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 EP400NLQ6ZTU2 488 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 TMEM192Q8IY95 271 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 PABPC5Q96DU9 382 aaKnown RBP16.95■□□□□ 0.3
MCF2L-220ENST00000464800 IFIH1Q9BYX4 1025 aaKnown RBP16.95■□□□□ 0.3
MCF2L-220ENST00000464800 NSUN3Q9H649 340 aaKnown RBP16.95■□□□□ 0.3
MCF2L-220ENST00000464800 PIEZO1Q92508 2521 aa16.95■□□□□ 0.3
MCF2L-220ENST00000464800 KAT6AQ92794 2004 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-220ENST00000464800 DCXO43602 365 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 TRAF1Q13077 416 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 GNPTABQ3T906 1256 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 APBB2Q92870 758 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.3
MCF2L-220ENST00000464800 ZFP91Q96JP5 570 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-220ENST00000464800 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
MCF2L-220ENST00000464800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-220ENST00000464800 HIP1O00291 1037 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 GNAT1P11488 350 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 COL19A1Q14993 1142 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 ALYREFQ86V81 257 aaKnown RBP16.93■□□□□ 0.3
MCF2L-220ENST00000464800 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 RNPEPQ9H4A4 650 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 PRKAG3Q9UGI9 489 aa16.93■□□□□ 0.3
MCF2L-220ENST00000464800 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
MCF2L-220ENST00000464800 ZP2Q05996 745 aa16.92■□□□□ 0.3
MCF2L-220ENST00000464800 SEC23AQ15436 765 aa16.92■□□□□ 0.3
MCF2L-220ENST00000464800 METTL7BQ6UX53 244 aa16.92■□□□□ 0.3
MCF2L-220ENST00000464800 OSBPL7Q9BZF2 842 aa16.92■□□□□ 0.3
MCF2L-220ENST00000464800 CLDND1Q9NY35 253 aa16.92■□□□□ 0.3
MCF2L-220ENST00000464800 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-220ENST00000464800 PALM3A6NDB9 673 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-220ENST00000464800 NCK2O43639 380 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 STAM2O75886 525 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 CTNNB1P35222 781 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 NEDD9Q14511 834 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 PLEKHM2Q8IWE5 1019 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 PIGSQ96S52 555 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 FRMPD4Q14CM0 1322 aa16.91■□□□□ 0.3
MCF2L-220ENST00000464800 ICAM3P32942 547 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 GRM4Q14833 912 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 CYFIP1Q7L576 1253 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 TRIM50Q86XT4 487 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 ADHFE1Q8IWW8 467 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 SMC5Q8IY18 1101 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 INPP4AQ96PE3 977 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-220ENST00000464800 GPR20Q99678 358 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-220ENST00000464800 RIOX1Q9H6W3 641 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
MCF2L-220ENST00000464800 KIAA1671Q9BY89 1806 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 POTEB3A0JP26 581 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 C19orf67A6NJJ6 358 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 SPATA31C2B4DYI2 1134 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 C5orf67F2Z3F1 127 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 FIBPO43427 364 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
MCF2L-220ENST00000464800 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 FAM26DQ5JW98 314 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 POTEBQ6S5H4 581 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 CYB5R4Q7L1T6 521 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 LMBR1Q8WVP7 490 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
MCF2L-220ENST00000464800 LMAN2LQ9H0V9 348 aa16.89■□□□□ 0.29
MCF2L-220ENST00000464800 KCNH6Q9H252 994 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms