RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DGKHQ86XP1 1220 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 RAPGEF5Q92565 580 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 CDK5RAP3Q96JB5 506 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 KDM4CQ9H3R0 1056 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ 0
PTPRE-204ENST00000455661 STK17AQ9UEE5 414 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 NOVA2Q9UNW9 492 aaKnown RBP15.05■□□□□ 0
PTPRE-204ENST00000455661 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ 0
PTPRE-204ENST00000455661 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
PTPRE-204ENST00000455661 ZNF804BA4D1E1 1349 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 A0A1B0GUA9 196 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 STXBP3O00186 592 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 XRCC4Q13426 336 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 GRM4Q14833 912 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 CRYMQ14894 314 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 UAP1Q16222 522 aaPredicted RBP15.05■□□□□ -0
PTPRE-204ENST00000455661 CAVIN4Q5BKX8 364 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 SUSD4Q5VX71 490 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 MSL1Q68DK7 614 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 PROM2Q8N271 834 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 LSM14BQ9BX40 385 aaKnown RBP15.05■□□□□ -0
PTPRE-204ENST00000455661 DCP1AQ9NPI6 582 aaPredicted RBP15.05■□□□□ -0
PTPRE-204ENST00000455661 ATP8A2Q9NTI2 1148 aa15.05■□□□□ -0
PTPRE-204ENST00000455661 CEP104O60308 925 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 DNAJC8O75937 253 aaPredicted RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 ERCC3P19447 782 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 ECHS1P30084 290 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 POLR2FP61218 127 aaKnown RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 KLHL30Q0D2K2 578 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 PSMD2Q13200 908 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 DYMQ7RTS9 669 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 ACTRT1Q8TDG2 376 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 SCFD2Q8WU76 684 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 ANKS1AQ92625 1134 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 TATDN2Q93075 761 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 ZNF622Q969S3 477 aaKnown RBP eCLIP15.04■□□□□ -0
PTPRE-204ENST00000455661 HVCN1Q96D96 273 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 LRRC27Q9C0I9 530 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 CNOT10Q9H9A5 744 aaKnown RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 COL4A3BPQ9Y5P4 624 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 MYMKA6NI61 221 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 TLR2O60603 784 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 ATP2C2O75185 946 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 RAPGEF1Q13905 1077 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 C10orf76Q5T2E6 689 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 FOXR2Q6PJQ5 311 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 NEK8Q86SG6 692 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 LARP4BQ92615 738 aaKnown RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 MMTAG2Q9BU76 263 aaKnown RBP15.04■□□□□ -0
PTPRE-204ENST00000455661 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
PTPRE-204ENST00000455661 BTNL10A8MVZ5 291 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 KIF4AO95239 1232 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 CLNS1AP54105 237 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 MAGOHP61326 146 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 FKBP3Q00688 224 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 TFAP4Q01664 338 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 PPARDQ03181 441 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 EVX2Q03828 476 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 ASIC2Q16515 512 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 SBK1Q52WX2 424 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 FAM228AQ86W67 206 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 MAGOHBQ96A72 148 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 ADAMTS1Q9UHI8 967 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 MAD2L2Q9UI95 211 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 CACNA1SQ13698 1873 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 A0A087X0T9 212 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 A0A0G2JS52 829 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 CCDC188H7C350 402 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 PGRMC1O00264 195 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 NOL4O94818 638 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 FAM228BP0C875 321 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 USP11P51784 963 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 ARID5AQ03989 594 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 E2F5Q15329 346 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 KRT71Q3SY84 523 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 DDX42Q86XP3 938 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRE-204ENST00000455661 TEX11Q8IYF3 940 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 CCDC26Q8TAB7 109 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 CCT6BQ92526 530 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 PSMD1Q99460 953 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 C6orf50Q9HD87 102 aa15.03■□□□□ -0
PTPRE-204ENST00000455661 CNOT8Q9UFF9 292 aaKnown RBP15.03■□□□□ -0
PTPRE-204ENST00000455661 TRAF5O00463 557 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 MGRN1O60291 552 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 CYP2D6P10635 497 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 GNA11P29992 359 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 GBP2P32456 591 aaPredicted RBP15.02■□□□□ -0
PTPRE-204ENST00000455661 TXKP42681 527 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 NAPAP54920 295 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 ORC2Q13416 577 aaPredicted RBP15.02■□□□□ -0
PTPRE-204ENST00000455661 SPRED3Q2MJR0 410 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 ANKS4BQ8N8V4 417 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 CHMP6Q96FZ7 201 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 BLOC1S4Q9NUP1 217 aa15.02■□□□□ -0
PTPRE-204ENST00000455661 TOGARAM1Q9Y4F4 1720 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms