RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 FIBPO43427 364 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 CALM1P0DP23 149 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 CALM2P0DP24 149 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 CALM3P0DP25 149 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 WDR5P61964 334 aaKnown RBP21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 EXOSC10Q01780 885 aaKnown RBP21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 RASEFQ8IZ41 740 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 SMARCC2Q8TAQ2 1214 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 GPR20Q99678 358 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 SEC63Q9UGP8 760 aaKnown RBP21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 SLC12A7Q9Y666 1083 aa21.33■■□□□ 1.01
UBE2D4-208ENST00000454350 COL4A4P53420 1690 aaPredicted RBP21.33■■□□□ 1
UBE2D4-208ENST00000454350 EPOPA6NHQ4 379 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 H3BRB1 525 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 PARNO95453 639 aaKnown RBP21.32■■□□□ 1
UBE2D4-208ENST00000454350 MKRN4PQ13434 485 aaPredicted RBP21.32■■□□□ 1
UBE2D4-208ENST00000454350 NEDD9Q14511 834 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 XRRA1Q6P2D8 792 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 CNKSR3Q6P9H4 555 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 CYFIP1Q7L576 1253 aa21.32■■□□□ 1
UBE2D4-208ENST00000454350 TUT1Q9H6E5 874 aaKnown RBP21.32■■□□□ 1
UBE2D4-208ENST00000454350 BRWD1Q9NSI6 2320 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 DEFB103AP81534 67 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 TAP1Q03518 808 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 FUT2Q10981 343 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 APOA5Q6Q788 366 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 SPRED2Q7Z698 418 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 TMCO2Q7Z6W1 182 aaPredicted RBP21.31■■□□□ 1
UBE2D4-208ENST00000454350 CUL5Q93034 780 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 SENP7Q9BQF6 1050 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 PSTPIP2Q9H939 334 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 BRPF3Q9ULD4 1205 aa21.31■■□□□ 1
UBE2D4-208ENST00000454350 CNTNAP5Q8WYK1 1306 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 RFXAPO00287 272 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 ATP9AO75110 1047 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 SMIM10L2AP0DMW4 78 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 SMIM10L2BP0DMW5 78 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 POU3F3P20264 500 aaPredicted RBP21.3■■□□□ 1
UBE2D4-208ENST00000454350 IGFBP4P22692 258 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 UBE2SQ16763 222 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 MICU3Q86XE3 530 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 TRIM50Q86XT4 487 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 CCDC82Q8N4S0 544 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 PPM1EQ8WY54 764 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 TCEANC2Q96MN5 208 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 NEK1Q96PY6 1258 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 USP26Q9BXU7 913 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 OSBPL7Q9BZF2 842 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 RNPEPQ9H4A4 650 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 XIRP2A4UGR9 3374 aa21.3■■□□□ 1
UBE2D4-208ENST00000454350 TREHO43280 583 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 KCNA2P16389 499 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 ITGB5P18084 799 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 ADAM17P78536 824 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 TYW1BQ6NUM6 668 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 UBIAD1Q9Y5Z9 338 aa21.29■■□□□ 1
UBE2D4-208ENST00000454350 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
UBE2D4-208ENST00000454350 LOXHD1Q8IVV2 1947 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 C17orf102A2RUQ5 167 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 LCHNA4D1U4 455 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 NOP56O00567 594 aaKnown RBP21.28■■□□□ 1
UBE2D4-208ENST00000454350 CCDC85BQ15834 202 aaPredicted RBP21.28■■□□□ 1
UBE2D4-208ENST00000454350 RNF20Q5VTR2 975 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
UBE2D4-208ENST00000454350 ATP6V0A1Q93050 837 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 GPRASP2Q96D09 838 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 CERS4Q9HA82 394 aa21.28■■□□□ 1
UBE2D4-208ENST00000454350 FAM217BQ9NTX9 383 aaPredicted RBP21.28■■□□□ 1
UBE2D4-208ENST00000454350 ABHD14A-ACY1A0A1B0GW23 586 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 WWC2Q6AWC2 1192 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 KCNB2Q92953 911 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 PCDHA6Q9UN73 950 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 PCDHA8Q9Y5H6 950 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 MTCH2Q9Y6C9 303 aa21.27■■□□□ 1
UBE2D4-208ENST00000454350 TLL1O43897 1013 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 CDC45O75419 566 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 LGR5O75473 907 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 THPOP40225 353 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 KCNJ6P48051 423 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 PLEKHG4Q58EX7 1191 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 TJAP1Q5JTD0 557 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 HEATR3Q7Z4Q2 680 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 NLRX1Q86UT6 975 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 SETD4Q9NVD3 440 aa21.26■□□□□ 0.99
UBE2D4-208ENST00000454350 WDR81Q562E7 1941 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 GSTTP1A0A1W2PQM5 241 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 RSPH10B2B2RC85 870 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 LPXNO60711 386 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 GJB5O95377 273 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 RSPH10BP0C881 870 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 SP4Q02446 784 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 DBF4BQ8NFT6 615 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 LMBR1Q8WVP7 490 aa21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 RBM28Q9NW13 759 aaKnown RBP21.25■□□□□ 0.99
UBE2D4-208ENST00000454350 NLRC5Q86WI3 1866 aa21.24■□□□□ 0.99
UBE2D4-208ENST00000454350 KIF28PB7ZC32 967 aa21.24■□□□□ 0.99
UBE2D4-208ENST00000454350 CDC27P30260 824 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms