RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CT47B1P0C2W7 299 aaPredicted RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 KRT15P19012 456 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 SERPINB3P29508 390 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 PCBP3P57721 371 aaKnown RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 TEKQ02763 1124 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 LAPTM5Q13571 262 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 GPR19Q15760 415 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 C4orf46Q504U0 113 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 GPR158Q5T848 1215 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 ESRP1Q6NXG1 681 aaKnown RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 ARHGAP36Q6ZRI8 547 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 SPACA3Q8IXA5 215 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 Q8N1Y9 231 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 KIAA1958Q8N8K9 716 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZNF610Q8N9Z0 462 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 GIMAP7Q8NHV1 300 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 JADE3Q92613 823 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 DLG3Q92796 817 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 SCARF2Q96GP6 870 aaPredicted RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 TEKT5Q96M29 485 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 HSPA12BQ96MM6 686 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 TBC1D32Q96NH3 1257 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 PRDM11Q9NQV5 511 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 DDX21Q9NR30 783 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 SEMA3GQ9NS98 782 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 NOP53Q9NZM5 478 aaKnown RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 USP25Q9UHP3 1055 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 TAGLN3Q9UI15 199 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 DNM3Q9UQ16 869 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 PCDHA11Q9Y5I1 949 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 WASHC2AQ641Q2 1341 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 TRBV23OR9-2A0A075B6M9 112 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 KLHL33A6NCF5 533 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 H7C1D1 291 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 WFS1O76024 890 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 FXR1P51114 621 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 USP14P54578 494 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 OS9Q13438 667 aaPredicted RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 MOGSQ13724 837 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 MORC3Q14149 939 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 DHX8Q14562 1220 aaKnown RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 IFI16Q16666 785 aaKnown RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 RRP12Q5JTH9 1297 aaKnown RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 CEP68Q76N32 757 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 OTOP3Q7RTS5 596 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 SPICE1Q8N0Z3 855 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM181AQ8N9Y4 354 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 SLC35G2Q8TBE7 412 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 UBE2FQ969M7 185 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZNF496Q96IT1 587 aaPredicted RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 CHAMP1Q96JM3 812 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 NUP88Q99567 741 aaPredicted RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 CDADC1Q9BWV3 514 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 C7orf69Q9H7B7 122 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 TOMM22Q9NS69 142 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 CCM2LQ9NUG4 571 aaPredicted RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 ERVK13-1Q9NX77 482 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZSWIM5Q9P217 1185 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 PTPN22Q9Y2R2 807 aa5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 FRMPD2Q68DX3 1309 aaPredicted RBP5.42□□□□□ -1.54
HMGN3P1-201ENST00000453847 ANO9A1A5B4 782 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM155AB1AL88 458 aaPredicted RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 H3BS24 57 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 H7BY64 318 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 DHX15O43143 795 aaKnown RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 ESR1P03372 595 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 F13BP05160 661 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 U2AF1L5P0DN76 240 aaPredicted RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 FPR2P25090 351 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 LSP1P33241 339 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 RPL11P62913 178 aaKnown RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 IRF9Q00978 393 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 U2AF1Q01081 240 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZNF267Q14586 743 aaPredicted RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 BRD3Q15059 726 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 ARHGAP29Q52LW3 1261 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 CPZQ66K79 652 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 RNF111Q6ZNA4 994 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 CHST15Q7LFX5 561 aaPredicted RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 TXNRD3Q86VQ6 643 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 PLEKHO2Q8TD55 490 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 TGFBRAP1Q8WUH2 860 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 TAAR9Q96RI9 348 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 TRIT1Q9H3H1 467 aaKnown RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 SEMA4AQ9H3S1 761 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 PTPRHQ9HD43 1115 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 ADGRE2Q9UHX3 823 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 NOC2LQ9Y3T9 749 aaKnown RBP5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 B3GALT1Q9Y5Z6 326 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 X6R8D5 127 aa5.41□□□□□ -1.54
HMGN3P1-201ENST00000453847 GNAT3A8MTJ3 354 aa5.4□□□□□ -1.54
HMGN3P1-201ENST00000453847 PIK3R2O00459 728 aa5.4□□□□□ -1.54
HMGN3P1-201ENST00000453847 XPOTO43592 962 aaKnown RBP5.4□□□□□ -1.54
HMGN3P1-201ENST00000453847 MYO1BO43795 1136 aa5.4□□□□□ -1.54
HMGN3P1-201ENST00000453847 PPFIA4O75335 1185 aa5.4□□□□□ -1.54
HMGN3P1-201ENST00000453847 IL33O95760 270 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms