RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SCG5P05408 212 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 GLI4P10075 376 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 GRIA2P42262 883 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 KCNJ6P48051 423 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 MAPKAPK2P49137 400 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 TCEA2Q15560 299 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 PLEKHN1Q494U1 663 aaPredicted RBP5.91□□□□□ -1.46
LINC00393-202ENST00000452852 DALRD3Q5D0E6 543 aaKnown RBP5.91□□□□□ -1.46
LINC00393-202ENST00000452852 ZC3H14Q6PJT7 736 aaKnown RBP5.91□□□□□ -1.46
LINC00393-202ENST00000452852 KREMEN2Q8NCW0 462 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 ST13P5Q8NFI4 369 aaPredicted RBP5.91□□□□□ -1.46
LINC00393-202ENST00000452852 DPF3Q92784 378 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 MTA3Q9BTC8 594 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 ATP10AO60312 1499 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 LMTK3Q96Q04 1460 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 FYCO1Q9BQS8 1478 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 ZC3H12DA2A288 527 aaKnown RBP5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CPP00450 1065 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CFPP27918 469 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CDR1P51861 262 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 GFRA1P56159 465 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 EVA1CP58658 441 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 LDHDQ86WU2 507 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 LRRC56Q8IYG6 542 aaPredicted RBP5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CCDC140Q96MF4 163 aa5.9□□□□□ -1.46
LINC00393-202ENST00000452852 CASKIN1Q8WXD9 1431 aa5.9□□□□□ -1.47
LINC00393-202ENST00000452852 ABCC1P33527 1531 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 KDM5CP41229 1560 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 N4BP3O15049 544 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 FUCA1P04066 466 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 LINC00310P59036 64 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 E4F1Q66K89 784 aaPredicted RBP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 CABP7Q86V35 215 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 C1QL4Q86Z23 238 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 TMEM145Q8NBT3 493 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 USP33Q8TEY7 942 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 MZB1Q8WU39 189 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 DIO2Q92813 273 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 SPATA9Q9BWV2 254 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 FAM126AQ9BYI3 521 aaPredicted RBP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 IRF2BPLQ9H1B7 796 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 DBR1Q9UK59 544 aaKnown RBP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 CNOT6Q9ULM6 557 aaKnown RBP5.89□□□□□ -1.47
LINC00393-202ENST00000452852 ARHGEF12Q9NZN5 1544 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 REREQ9P2R6 1566 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 DIP2CQ9Y2E4 1556 aa5.89□□□□□ -1.47
LINC00393-202ENST00000452852 ABCA6Q8N139 1617 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 MEFVO15553 781 aaPredicted RBP5.88□□□□□ -1.47
LINC00393-202ENST00000452852 NCKAP1LP55160 1127 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 PRR5P85299 388 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 ZNF200P98182 395 aaPredicted RBP5.88□□□□□ -1.47
LINC00393-202ENST00000452852 SSPNQ14714 243 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 ACBD5Q5T8D3 534 aaPredicted RBP5.88□□□□□ -1.47
LINC00393-202ENST00000452852 DENND5AQ6IQ26 1287 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 IGDCC3Q8IVU1 814 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 TEX2Q8IWB9 1127 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 PPIL6Q8IXY8 311 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 PLEKHO2Q8TD55 490 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 C1orf159Q96HA4 380 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 SGSM3Q96HU1 749 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 IER2Q9BTL4 223 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 MARCH2Q9P0N8 246 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 RAPGEFL1Q9UHV5 662 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 PLA2G2DQ9UNK4 145 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 PCDHA5Q9Y5H7 936 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 C3P01024 1663 aa5.88□□□□□ -1.47
LINC00393-202ENST00000452852 SETD1BQ9UPS6 1966 aaKnown RBP5.87□□□□□ -1.47
LINC00393-202ENST00000452852 IQCA1LA6NCM1 817 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 NUAK1O60285 661 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 S100BP04271 92 aaPredicted RBP5.87□□□□□ -1.47
LINC00393-202ENST00000452852 NTRK1P04629 796 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 PDGFRBP09619 1106 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 KCNAB2Q13303 367 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
LINC00393-202ENST00000452852 SLC35F1Q5T1Q4 408 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 CIAPIN1Q6FI81 312 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 NETO2Q8NC67 525 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 RCBTB1Q8NDN9 531 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 ZSWIM2Q8NEG5 633 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 FBXO41Q8TF61 875 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 SIGLEC10Q96LC7 697 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 TIMM13Q9Y5L4 95 aaPredicted RBP5.87□□□□□ -1.47
LINC00393-202ENST00000452852 IRAK3Q9Y616 596 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 SUPT6HQ7KZ85 1726 aaKnown RBP5.87□□□□□ -1.47
LINC00393-202ENST00000452852 KIDINS220Q9ULH0 1771 aa5.87□□□□□ -1.47
LINC00393-202ENST00000452852 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms