RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PRC1O43663 620 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 LGR5O75473 907 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 GJB5O95377 273 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 LGALS2P05162 132 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 THPOP40225 353 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 HIC1Q14526 733 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 NFXL1Q6ZNB6 911 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 ADAMTS19Q8TE59 1207 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 WNT8BQ93098 351 aa23.92■■□□□ 1.42
CPNE1-219ENST00000440240 EPOPA6NHQ4 379 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 CCDC69A6NI79 296 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 RSPH10B2B2RC85 870 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 ARHGEF15O94989 841 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 RSPH10BP0C881 870 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 GNAT1P11488 350 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 DEFB103AP81534 67 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 PCNX4Q63HM2 1172 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 CYFIP1Q7L576 1253 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 SENP7Q9BQF6 1050 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 MYL10Q9BUA6 226 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 BCAS3Q9H6U6 928 aa23.91■■□□□ 1.42
CPNE1-219ENST00000440240 SMIM10L2AP0DMW4 78 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 SMIM10L2BP0DMW5 78 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 CALM1P0DP23 149 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 CALM2P0DP24 149 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 CALM3P0DP25 149 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 HOXC8P31273 242 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 LIFRP42702 1097 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 MBTPS1Q14703 1052 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 USP17L6PQ6QN14 398 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 TMCO2Q7Z6W1 182 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-219ENST00000440240 NLRX1Q86UT6 975 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 GIMAP8Q8ND71 665 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-219ENST00000440240 UHRF1Q96T88 793 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-219ENST00000440240 GPR20Q99678 358 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 RNPEPQ9H4A4 650 aa23.9■■□□□ 1.42
CPNE1-219ENST00000440240 BDP1A6H8Y1 2624 aa23.89■■□□□ 1.42
CPNE1-219ENST00000440240 MEIS2O14770 477 aa23.89■■□□□ 1.41
CPNE1-219ENST00000440240 GRB10Q13322 594 aa23.89■■□□□ 1.41
CPNE1-219ENST00000440240 TCTN1Q2MV58 587 aa23.89■■□□□ 1.41
CPNE1-219ENST00000440240 LSG1Q9H089 658 aaKnown RBP23.89■■□□□ 1.41
CPNE1-219ENST00000440240 LMCD1Q9NZU5 365 aa23.89■■□□□ 1.41
CPNE1-219ENST00000440240 ZNF215Q9UL58 517 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-219ENST00000440240 COG5Q9UP83 839 aa23.89■■□□□ 1.41
CPNE1-219ENST00000440240 LCHNA4D1U4 455 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 SH2B2O14492 632 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-219ENST00000440240 TREHO43280 583 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 CAND2O75155 1236 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 SEMA3FQ13275 785 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 SRBD1Q8N5C6 995 aaKnown RBP23.88■■□□□ 1.41
CPNE1-219ENST00000440240 DBF4BQ8NFT6 615 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 PSTPIP2Q9H939 334 aa23.88■■□□□ 1.41
CPNE1-219ENST00000440240 SLC27A2O14975 620 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 BMP1P13497 986 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 CDHR1Q96JP9 859 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 TGS1Q96RS0 853 aaKnown RBP23.87■■□□□ 1.41
CPNE1-219ENST00000440240 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 INSL6Q9Y581 213 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 SLC12A7Q9Y666 1083 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 XIRP2A4UGR9 3374 aa23.87■■□□□ 1.41
CPNE1-219ENST00000440240 PLEKHA8P1O95397 391 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 AMHP03971 560 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 ERVK-21P61565 698 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 TFF2Q03403 129 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 NECTIN1Q15223 517 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 PLEKHG4Q58EX7 1191 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 KRT40Q6A162 431 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 SETD4Q9NVD3 440 aa23.86■■□□□ 1.41
CPNE1-219ENST00000440240 LPXNO60711 386 aa23.85■■□□□ 1.41
CPNE1-219ENST00000440240 UTP14CQ5TAP6 766 aaKnown RBP23.85■■□□□ 1.41
CPNE1-219ENST00000440240 CREB3L3Q68CJ9 461 aa23.85■■□□□ 1.41
CPNE1-219ENST00000440240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.85■■□□□ 1.411e-8■■□□□ 11.7
CPNE1-219ENST00000440240 SPRED2Q7Z698 418 aa23.85■■□□□ 1.41
CPNE1-219ENST00000440240 SEPT8Q92599 483 aa23.85■■□□□ 1.41
CPNE1-219ENST00000440240 GPRASP2Q96D09 838 aa23.85■■□□□ 1.41
CPNE1-219ENST00000440240 REV3LO60673 3130 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 FAM117BQ6P1L5 589 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 CMTR1Q8N1G2 835 aaKnown RBP23.84■■□□□ 1.41
CPNE1-219ENST00000440240 FANCBQ8NB91 859 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 HLA-CQ95604 372 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 SUGCTQ9HAC7 445 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 NRCAMQ92823 1304 aa23.84■■□□□ 1.41
CPNE1-219ENST00000440240 LINC01553A4QN01 128 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 MAFGO15525 162 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 RXRAP19793 462 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 SP4Q02446 784 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 MKRN4PQ13434 485 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-219ENST00000440240 RNF20Q5VTR2 975 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 SYNE3Q6ZMZ3 975 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 TRIM50Q86XT4 487 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 MYOCDQ8IZQ8 938 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 ANO2Q9NQ90 1003 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 MTUS1Q9ULD2 1270 aa23.83■■□□□ 1.41
CPNE1-219ENST00000440240 SPDYE3A6NKU9 549 aa23.82■■□□□ 1.4
CPNE1-219ENST00000440240 ADAM17P78536 824 aa23.82■■□□□ 1.4
CPNE1-219ENST00000440240 ARHGAP4P98171 946 aa23.82■■□□□ 1.4
CPNE1-219ENST00000440240 CCDC82Q8N4S0 544 aa23.82■■□□□ 1.4
CPNE1-219ENST00000440240 SEPT1Q8WYJ6 367 aa23.82■■□□□ 1.4
CPNE1-219ENST00000440240 PTPRSQ13332 1948 aa23.81■■□□□ 1.4
CPNE1-219ENST00000440240 CTSHP09668 335 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms