RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 GMLQ99445 158 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 MMRN2Q9H8L6 949 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 GUCA1BQ9UMX6 200 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 RBBP6Q7Z6E9 1792 aaKnown RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 RASSF10A6NK89 507 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 EIF3CLB5ME19 914 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 GCOM1H8Y6P7 765 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 MSH4O15457 936 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 KRT86O43790 486 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CFBP00751 764 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 POLR2MP0CAP2 368 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 RPA1P27694 616 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 BAG6P46379 1132 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CLCN6P51797 869 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 SLC12A3P55017 1021 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 HERVK_113P62684 666 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CDK17Q00537 523 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 BMS1Q14692 1282 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 SPA17Q15506 151 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CCDC122Q5T0U0 273 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 WDR59Q6PJI9 974 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 TMCO3Q6UWJ1 677 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 RSRC2Q7L4I2 434 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 CCDC84Q86UT8 332 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 EIF3CQ99613 913 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 TSGA10Q9BZW7 698 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 SIK3Q9Y2K2 1263 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
CPNE1-218ENST00000439806 COL4A5P29400 1685 aa11.55□□□□□ -0.56
CPNE1-218ENST00000439806 MYH11P35749 1972 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FAM86B1E9PN63 330 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 MEIS1O00470 390 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 OPLAHO14841 1288 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 TBC1D12O60347 775 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 TBCAO75347 108 aaKnown RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FAM86B2P0C5J1 330 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 EPS15P42566 896 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 CHMP4BP1P59074 171 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 TUBB4BP68371 445 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 SPIRE1Q08AE8 756 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 RAD51AP2Q09MP3 1159 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 ZYXQ15942 572 aaKnown RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 ZCWPW2Q504Y3 356 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 ZNF662Q6ZS27 426 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 SMAP1Q8IYB5 467 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 SYT2Q8N9I0 419 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 LENG9Q96B70 501 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 POLR3CQ9BUI4 534 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 RANBP17Q9H2T7 1088 aaKnown RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 PUF60Q9UHX1 559 aaKnown RBP11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FEM1BQ9UK73 627 aa11.54□□□□□ -0.56
CPNE1-218ENST00000439806 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 CETN3O15182 167 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-218ENST00000439806 PLA2G6O60733 806 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 USO1O60763 962 aaKnown RBP11.53□□□□□ -0.56
CPNE1-218ENST00000439806 EYA4O95677 639 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 CAP2P40123 477 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 VAV2P52735 878 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 GIT2Q14161 759 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 CIAPIN1Q6FI81 312 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 SFR1Q86XK3 245 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 EIF2AK1Q9BQI3 630 aaKnown RBP11.53□□□□□ -0.56
CPNE1-218ENST00000439806 LSM14BQ9BX40 385 aaKnown RBP11.53□□□□□ -0.56
CPNE1-218ENST00000439806 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 ZSWIM4Q9H7M6 989 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms