RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PSMC6P62333 389 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 SCRN1Q12765 414 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PKN1Q16512 942 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 FSCN1Q16658 493 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PFKFB3Q16875 520 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 DUSP28Q4G0W2 176 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 SWT1Q5T5J6 900 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 JAKMIP3Q5VZ66 844 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 CXCL17Q6UXB2 119 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 SAMD3Q8N6K7 520 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 KLHDC9Q8NEP7 349 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ANKK1Q8NFD2 765 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 IL31RAQ8NI17 732 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 SCFD2Q8WU76 684 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 LRCH3Q96II8 777 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZFRQ96KR1 1074 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 AIFM3Q96NN9 605 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 UIMC1Q96RL1 719 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 MAF1Q9H063 256 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ALDH8A1Q9H2A2 487 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 BCAS3Q9H6U6 928 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PKD2L1Q9P0L9 805 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 DDX41Q9UJV9 622 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 PHF24Q9UPV7 400 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 NR2E3Q9Y5X4 410 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 MRVI1Q9Y6F6 885 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 LRRC37A2A6NM11 1700 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 LOC102724159A0A0B4J2E5 919 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 POTEMA6NI47 508 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 PIK3CDO00329 1044 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZEB2O60315 1214 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 PFKFB2O60825 505 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 PQBP1O60828 265 aaKnown RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 RGS20O76081 388 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 LARGE1O95461 756 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 IFNAR1P17181 557 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZNF76P36508 570 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 RCAN1P53805 252 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 NLRP5P59047 1200 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 SP2Q02086 613 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 GHRHRQ02643 423 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 PWP2Q15269 919 aaKnown RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 ME3Q16798 604 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 CCSAPQ6IQ19 270 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 DHX37Q8IY37 1157 aaKnown RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 GLT1D1Q96MS3 346 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 UPF3AQ9H1J1 476 aaKnown RBP6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 MLXIPQ9HAP2 919 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 RIC8AQ9NPQ8 531 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 BARHL2Q9NY43 387 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 VPS54Q9P1Q0 977 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 Q9Y3F1 56 aa6.61□□□□□ -1.35
HMGB3P24-201ENST00000433260 MOXD2PA6NHM9 499 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 NKRFO15226 690 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 HRO43593 1189 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 ATP9AO75110 1047 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 GGPS1O95749 300 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 GH1P01241 217 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 CD46P15529 392 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 CPT1AP50416 773 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 SP4Q02446 784 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 TLE2Q04725 743 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 ARHGAP1Q07960 439 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 ITGA7Q13683 1181 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 FAM47CQ5HY64 1035 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 PCNX4Q63HM2 1172 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 CCDC62Q6P9F0 684 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 CPLX2Q6PUV4 134 aaKnown RBP6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 SH3RF1Q7Z6J0 888 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 NLRX1Q86UT6 975 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 RASGRP4Q8TDF6 673 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 AFG1LQ8WV93 481 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 PCMTD1Q96MG8 357 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 KIF2CQ99661 725 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 ALG1Q9BT22 464 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 RNF26Q9BY78 433 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 UPF2Q9HAU5 1272 aaKnown RBP6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 GJB4Q9NTQ9 266 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 KCNJ14Q9UNX9 436 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 TELO2Q9Y4R8 837 aa6.6□□□□□ -1.35
HMGB3P24-201ENST00000433260 TRIM43BA6NCK2 446 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 DCDC2CA8MYV0 355 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 SPATA31C2B4DYI2 1134 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 hCG_1984214I3L0E3 225 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 DEXIO95424 95 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 CTDNEP1O95476 244 aa6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P24-201ENST00000433260 ITGB5P18084 799 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 227.6 ms