RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 AFAP1L1Q8TED9 768 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 USP26Q9BXU7 913 aa20.14■□□□□ 0.81
NUP50-208ENST00000430547 NID2Q14112 1375 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 SMCO2A6NFE2 343 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 H3BRB1 525 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
NUP50-208ENST00000430547 IQCF3P0C7M6 154 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 TYW1BQ6NUM6 668 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 CCDC12Q8WUD4 166 aaPredicted RBP20.13■□□□□ 0.81
NUP50-208ENST00000430547 C16orf70Q9BSU1 422 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 FTOQ9C0B1 505 aaKnown RBP eCLIP20.13■□□□□ 0.81
NUP50-208ENST00000430547 TUT1Q9H6E5 874 aaKnown RBP20.13■□□□□ 0.81
NUP50-208ENST00000430547 BCAS3Q9H6U6 928 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
NUP50-208ENST00000430547 CYP46A1Q9Y6A2 500 aa20.13■□□□□ 0.81
NUP50-208ENST00000430547 SCG2P13521 617 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 PFKFB3Q16875 520 aaPredicted RBP20.12■□□□□ 0.81
NUP50-208ENST00000430547 GUCD1Q96NT3 240 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 GPR20Q99678 358 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 AGXT2Q9BYV1 514 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 CXXC1Q9P0U4 656 aaPredicted RBP20.12■□□□□ 0.81
NUP50-208ENST00000430547 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
NUP50-208ENST00000430547 MAFGO15525 162 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 SELPP16109 830 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 ITGB5P18084 799 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 PTK7Q13308 1070 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 AP3B2Q13367 1082 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 RAB30Q15771 203 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 UTP14CQ5TAP6 766 aaKnown RBP20.11■□□□□ 0.81
NUP50-208ENST00000430547 TIFAQ96CG3 184 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 ANO3Q9BYT9 981 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 ZSWIM6Q9HCJ5 1215 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 PKD2L1Q9P0L9 805 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 MSRAQ9UJ68 235 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 UBIAD1Q9Y5Z9 338 aa20.11■□□□□ 0.81
NUP50-208ENST00000430547 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 PARNO95453 639 aaKnown RBP20.1■□□□□ 0.81
NUP50-208ENST00000430547 LRRC8DQ7L1W4 858 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 TET1Q8NFU7 2136 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 PGBD1Q96JS3 809 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 CTAGE1Q96RT6 745 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 PBX4Q9BYU1 374 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 TTYH1Q9H313 450 aaPredicted RBP20.1■□□□□ 0.81
NUP50-208ENST00000430547 JADE2Q9NQC1 790 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 COL6A3P12111 3177 aa20.1■□□□□ 0.81
NUP50-208ENST00000430547 PRPF3O43395 683 aaKnown RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 CKBP12277 381 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 KCNA2P16389 499 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 TCF7P36402 384 aaPredicted RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 DHX38Q92620 1227 aaKnown RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 ATP6V0A1Q93050 837 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 PHKBQ93100 1093 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 MXRA8Q9BRK3 442 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 RNF26Q9BY78 433 aaPredicted RBP20.09■□□□□ 0.81
NUP50-208ENST00000430547 TM6SF1Q9BZW5 370 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
NUP50-208ENST00000430547 ATP9AO75110 1047 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 GNAT1P11488 350 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 PDIA3P30101 505 aaKnown RBP20.08■□□□□ 0.81
NUP50-208ENST00000430547 ZNF76P36508 570 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 PBX2P40425 430 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
NUP50-208ENST00000430547 RBL2Q08999 1139 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 MCTP2Q6DN12 878 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 TRIM50Q86XT4 487 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 CCDC148Q8NFR7 591 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 SLC26A6Q9BXS9 759 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.81
NUP50-208ENST00000430547 TMEM260Q9NX78 707 aa20.08■□□□□ 0.81
NUP50-208ENST00000430547 ESYT2A0FGR8 921 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 CPLX1O14810 134 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 ATP2A2P16615 1042 aaKnown RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 IFNAR1P17181 557 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 GNA11P29992 359 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 SREBF1P36956 1147 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 CLK2P49760 499 aaKnown RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 EVCP57679 992 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 CEP55Q53EZ4 464 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 JAKMIP3Q5VZ66 844 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 TRIM22Q8IYM9 498 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 REXO1Q8N1G1 1221 aaKnown RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 SEPT1Q8WYJ6 367 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 VWCEQ96DN2 955 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 SDF4Q9BRK5 362 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 ZNF576Q9H609 170 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 NCOA5Q9HCD5 579 aaKnown RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 JPH1Q9HDC5 661 aaPredicted RBP20.07■□□□□ 0.8
NUP50-208ENST00000430547 KCNH7Q9NS40 1196 aa20.07■□□□□ 0.8
NUP50-208ENST00000430547 BAIAP3O94812 1187 aa20.06■□□□□ 0.8
NUP50-208ENST00000430547 KCNJ6P48051 423 aa20.06■□□□□ 0.8
NUP50-208ENST00000430547 ARHGAP4P98171 946 aa20.06■□□□□ 0.8
NUP50-208ENST00000430547 MYO9BQ13459 2157 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms