RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 IGFBP4P22692 258 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 PTK7Q13308 1070 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 UBE2SQ16763 222 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 PCNX4Q63HM2 1172 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 KRT40Q6A162 431 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 TYW1BQ6NUM6 668 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 TMTC3Q6ZXV5 915 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 CENPQQ7L2Z9 268 aaPredicted RBP19.71■□□□□ 0.75
CPSF4-203ENST00000430038 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 TRIM50Q86XT4 487 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 SMARCC2Q8TAQ2 1214 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 KATNAL1Q9BW62 490 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 RNPEPQ9H4A4 650 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 TUT1Q9H6E5 874 aaKnown RBP19.71■□□□□ 0.75
CPSF4-203ENST00000430038 MICAL3Q7RTP6 2002 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 LCHNA4D1U4 455 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 TREHO43280 583 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 ACTN1P12814 892 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 WDR5P61964 334 aaKnown RBP19.7■□□□□ 0.74
CPSF4-203ENST00000430038 TAP1Q03518 808 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 FUT2Q10981 343 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 SERINC5Q86VE9 423 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 PHOSPHO2Q8TCD6 241 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 LZTS2Q9BRK4 669 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 FAM217BQ9NTX9 383 aaPredicted RBP19.7■□□□□ 0.74
CPSF4-203ENST00000430038 SLC12A7Q9Y666 1083 aa19.7■□□□□ 0.74
CPSF4-203ENST00000430038 SMIM10L2AP0DMW4 78 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 SMIM10L2BP0DMW5 78 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 ITGB5P18084 799 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 METTL7BQ6UX53 244 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 MICU3Q86XE3 530 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 SLC9A7Q96T83 725 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 PSTPIP2Q9H939 334 aa19.69■□□□□ 0.74
CPSF4-203ENST00000430038 TCF20Q9UGU0 1960 aaKnown RBP19.69■□□□□ 0.74
CPSF4-203ENST00000430038 SIP14410 1827 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 FIBPO43427 364 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 STAM2O75886 525 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 CPA1P15085 419 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 GNAQP50148 359 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 SP4Q02446 784 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 MKRN4PQ13434 485 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-203ENST00000430038 APOA5Q6Q788 366 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 CCDC155Q8N6L0 562 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 NEK1Q96PY6 1258 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 SETD4Q9NVD3 440 aa19.68■□□□□ 0.74
CPSF4-203ENST00000430038 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
CPSF4-203ENST00000430038 ADAMTS3O15072 1205 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 BAIAP3O94812 1187 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 CALM1P0DP23 149 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 CALM2P0DP24 149 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 CALM3P0DP25 149 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 KCNA2P16389 499 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 ADAM17P78536 824 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 NEDD9Q14511 834 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 TSGA10IPQ3SY00 556 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 GNPTABQ3T906 1256 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 WWC2Q6AWC2 1192 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 CNKSR3Q6P9H4 555 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.67■□□□□ 0.74
CPSF4-203ENST00000430038 CNTNAP5Q8WYK1 1306 aa19.67■□□□□ 0.74
CPSF4-203ENST00000430038 GSTTP1A0A1W2PQM5 241 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 C17orf102A2RUQ5 167 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 CDC27P30260 824 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 THPOP40225 353 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 UTP14CQ5TAP6 766 aaKnown RBP19.66■□□□□ 0.74
CPSF4-203ENST00000430038 CYP2W1Q8TAV3 490 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 CUL5Q93034 780 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 PGBD1Q96JS3 809 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 SENP7Q9BQF6 1050 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 USP26Q9BXU7 913 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 PCDHA6Q9UN73 950 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 PCDHA8Q9Y5H6 950 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 UBIAD1Q9Y5Z9 338 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 MTCH2Q9Y6C9 303 aa19.66■□□□□ 0.74
CPSF4-203ENST00000430038 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
CPSF4-203ENST00000430038 NOP56O00567 594 aaKnown RBP19.65■□□□□ 0.74
CPSF4-203ENST00000430038 LPXNO60711 386 aa19.65■□□□□ 0.74
CPSF4-203ENST00000430038 DHX32Q7L7V1 743 aaKnown RBP19.65■□□□□ 0.74
CPSF4-203ENST00000430038 HEATR3Q7Z4Q2 680 aa19.65■□□□□ 0.74
CPSF4-203ENST00000430038 DBF4BQ8NFT6 615 aa19.65■□□□□ 0.74
CPSF4-203ENST00000430038 PKD2L1Q9P0L9 805 aa19.65■□□□□ 0.74
CPSF4-203ENST00000430038 BRWD1Q9NSI6 2320 aa19.64■□□□□ 0.74
CPSF4-203ENST00000430038 RSPH10B2B2RC85 870 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 TLL1O43897 1013 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 RSPH10BP0C881 870 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 XRRA1Q6P2D8 792 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 ARNTL2Q8WYA1 636 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 V9GY48 417 aaPredicted RBP19.64■□□□□ 0.73
CPSF4-203ENST00000430038 LOXHD1Q8IVV2 1947 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 NCOR1O75376 2440 aa19.64■□□□□ 0.73
CPSF4-203ENST00000430038 ABHD14A-ACY1A0A1B0GW23 586 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 CDC45O75419 566 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 LGR5O75473 907 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 POU3F3P20264 500 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-203ENST00000430038 TCF7P36402 384 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-203ENST00000430038 KCNJ6P48051 423 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 FAM117BQ6P1L5 589 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 MICALL1Q8N3F8 863 aa19.63■□□□□ 0.73
CPSF4-203ENST00000430038 LMBR1Q8WVP7 490 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms