RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MARCH2Q9P0N8 246 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 TMEFF2Q9UIK5 374 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 DBR1Q9UK59 544 aaKnown RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 COA3Q9Y2R0 106 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 C22orf46C9J442 243 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 FUCA1P04066 466 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 APPP05067 770 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 NCAM1P13591 858 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 NAT1P18440 290 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 LSAMPQ13449 338 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 MROH9Q5TGP6 573 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 YOD1Q5VVQ6 348 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 DENND5AQ6IQ26 1287 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 STYK1Q6J9G0 422 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 MAMDC2Q7Z304 686 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 RCBTB1Q8NDN9 531 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 PLEKHO2Q8TD55 490 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 DPF3Q92784 378 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 DVL3Q92997 716 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 TRMT2BQ96GJ1 504 aaKnown RBP4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 TMEM169Q96HH4 297 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 DHRS4Q9BTZ2 278 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 PHF20Q9BVI0 1012 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 AP5M1Q9H0R1 490 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 BTG4Q9NY30 223 aa4.25□□□□□ -1.73
HMGB1P9-201ENST00000429856 F8W031 263 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ARNTLO00327 626 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 AQP7O14520 342 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 PPP1R11O60927 126 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 FZD7O75084 574 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 RAB11FIP3O75154 756 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZBTB7AO95365 584 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 FAM153BP0C7A2 387 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ATF2P15336 505 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ACVRL1P37023 503 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 BCL6P41182 706 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 SLC6A11P48066 632 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 SARSP49591 514 aaKnown RBP4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 GPR85P60893 370 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 GABREP78334 506 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 HTRA3P83110 453 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 CHRNA2Q15822 529 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 KIZQ2M2Z5 673 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 C2orf27AQ580R0 203 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 CEP68Q76N32 757 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 TEX2Q8IWB9 1127 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZFPM1Q8IX07 1006 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 SEC14L1Q92503 715 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 PTPRN2Q92932 1015 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 TSPAN17Q96FV3 270 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 CHAMP1Q96JM3 812 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 PCDHA2Q9Y5H9 948 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 X6R8D5 127 aa4.24□□□□□ -1.73
HMGB1P9-201ENST00000429856 ENPP3O14638 875 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 MAFKO60675 156 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 PLATP00750 562 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 SLPIP03973 132 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 NTRK1P04629 796 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 LCP1P13796 627 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 FPR2P25090 351 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 PRR5P85299 388 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 NTRK3Q16288 839 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 PTPROQ16827 1216 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 FAM209AQ5JX71 171 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 LBX2Q6XYB7 198 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 TTLL7Q6ZT98 887 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 NLRP10Q86W26 655 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 IFNL3Q8IZI9 196 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 LILRB2Q8N423 598 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 SH3RF3Q8TEJ3 882 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 KISS1RQ969F8 398 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 EXOC2Q96KP1 924 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 EPB41L1Q9H4G0 881 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 CLDND1Q9NY35 253 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 NTMQ9P121 344 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 FBLN5Q9UBX5 448 aa4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 MRPS23Q9Y3D9 190 aaKnown RBP4.23□□□□□ -1.73
HMGB1P9-201ENST00000429856 EFCAB14O75071 495 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 DGKIO75912 1065 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 FBLN1P23142 703 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 GRK2P25098 689 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 HSD3B2P26439 372 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 GRK3P35626 688 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 TBC1D10BQ4KMP7 808 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 FOXB2Q5VYV0 432 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 GLB1LQ6UWU2 654 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 ALG3Q92685 438 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 NUB1Q9Y5A7 615 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 PTCH2Q9Y6C5 1203 aa4.22□□□□□ -1.73
HMGB1P9-201ENST00000429856 FAM47E-STBD1D6RA91 191 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 KRIT1O00522 736 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 C6orf222P0C671 652 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 CRB2Q5IJ48 1285 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 EMC4Q5J8M3 183 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 CYP4F22Q6NT55 531 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms