RNA–Protein interactions for RNA: ENST00000425630.1

LINC00200-201, long intergenic non-protein coding RNA 200, humanhuman

TSL 1 (best) BASIC

Gene LINC00200, Length 2,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-201ENST00000425630 RAPGEF1Q13905 1077 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 SLC18A3Q16572 532 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 CEP85LQ5SZL2 805 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 MAATS1Q7Z4T9 603 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 CD302Q8IX05 232 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 PRPF38AQ8NAV1 312 aaKnown RBP18.65■□□□□ 0.58
LINC00200-201ENST00000425630 OR2W6PQ8NHA6 318 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 DNAJC19Q96DA6 116 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 ATP6V1G3Q96LB4 118 aa18.65■□□□□ 0.58
LINC00200-201ENST00000425630 A6NNZ2 444 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 USP17L5A8MUK1 530 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 MNAT1P51948 309 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 ERVK-9P63128 1117 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 FKBP3Q00688 224 aaKnown RBP18.64■□□□□ 0.58
LINC00200-201ENST00000425630 TUBB8Q3ZCM7 444 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 RIC8AQ9NPQ8 531 aa18.64■□□□□ 0.58
LINC00200-201ENST00000425630 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.58
LINC00200-201ENST00000425630 HPDP32754 393 aaPredicted RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 MDH1P40925 334 aaKnown RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 CDK8P49336 464 aa18.64■□□□□ 0.57
LINC00200-201ENST00000425630 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 ITGB3BPQ13352 177 aaPredicted RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 SWT1Q5T5J6 900 aaKnown RBP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC00200-201ENST00000425630 USP38Q8NB14 1042 aa18.64■□□□□ 0.57
LINC00200-201ENST00000425630 CEP95Q96GE4 821 aa18.64■□□□□ 0.57
LINC00200-201ENST00000425630 CCT8L2Q96SF2 557 aa18.64■□□□□ 0.57
LINC00200-201ENST00000425630 CEP89Q96ST8 783 aa18.64■□□□□ 0.57
LINC00200-201ENST00000425630 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 IRS2Q9Y4H2 1338 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 KCNQ2O43526 872 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 KIAA0754O94854 1291 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 ECHS1P30084 290 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 EMC10Q5UCC4 262 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 KRT79Q5XKE5 535 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
LINC00200-201ENST00000425630 MARCH10Q8NA82 808 aaPredicted RBP18.63■□□□□ 0.57
LINC00200-201ENST00000425630 MYCBPAPQ8TBZ2 947 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 SYN2Q92777 582 aaPredicted RBP18.63■□□□□ 0.57
LINC00200-201ENST00000425630 CENPHQ9H3R5 247 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
LINC00200-201ENST00000425630 SSBP05455 408 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00200-201ENST00000425630 MYBP10242 640 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 TMEM266Q2M3C6 531 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 TMEM119Q4V9L6 283 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 SLC10A5Q5PT55 438 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 NLRP14Q86W24 1093 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 ANKRD2Q9GZV1 360 aa18.63■□□□□ 0.57
LINC00200-201ENST00000425630 KCNK3O14649 394 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 HSPA9P38646 679 aaKnown RBP18.62■□□□□ 0.57
LINC00200-201ENST00000425630 HLTFQ14527 1009 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC00200-201ENST00000425630 PROM2Q8N271 834 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 WHAMMQ8TF30 809 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 GPR101Q96P66 508 aaPredicted RBP18.62■□□□□ 0.57
LINC00200-201ENST00000425630 NPHP3-ACAD11A0A0J9YXS1 232 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 PSMD2Q13200 908 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 UAP1Q16222 522 aaPredicted RBP18.62■□□□□ 0.57
LINC00200-201ENST00000425630 DDB1Q16531 1140 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 FAM26FQ5R3K3 315 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 TMEM59LQ9UK28 342 aa18.62■□□□□ 0.57
LINC00200-201ENST00000425630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC00200-201ENST00000425630 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
LINC00200-201ENST00000425630 H0YHG0 523 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 FSBPO95073 299 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 ACTN1P12814 892 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 RNF187Q5TA31 235 aaPredicted RBP18.61■□□□□ 0.57
LINC00200-201ENST00000425630 TRIM59Q8IWR1 403 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 AP1M1Q9BXS5 423 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 NEUROG2Q9H2A3 272 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
LINC00200-201ENST00000425630 TMBIM4Q9HC24 238 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 PPANQ9NQ55 473 aaKnown RBP18.61■□□□□ 0.57
LINC00200-201ENST00000425630 E7EVH7 732 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 HSD17B3P37058 310 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 TNNI2P48788 182 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 PDIA5Q14554 519 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 UBE2SQ16763 222 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 NEDD1Q8NHV4 660 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 NCAPGQ9BPX3 1015 aa18.61■□□□□ 0.57
LINC00200-201ENST00000425630 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
LINC00200-201ENST00000425630 HMGB1P1B2RPK0 211 aaPredicted RBP18.6■□□□□ 0.57
LINC00200-201ENST00000425630 BAG3O95817 575 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 IFT88Q13099 833 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 HAS1Q92839 578 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 GANQ9H2C0 597 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
LINC00200-201ENST00000425630 ESYT2A0FGR8 921 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 E9PMD0 336 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 H0YGN5 161 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 FLT3P36888 993 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 ADCY7P51828 1080 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 TNNC1P63316 161 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 PTK2Q05397 1052 aa18.6■□□□□ 0.57
LINC00200-201ENST00000425630 ORC2Q13416 577 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms