RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TCTN1Q2MV58 587 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 XRRA1Q6P2D8 792 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 USP17L6PQ6QN14 398 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 NFXL1Q6ZNB6 911 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
GPC1-203ENST00000425056 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 CUL5Q93034 780 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
GPC1-203ENST00000425056 XIRP2A4UGR9 3374 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 EPOPA6NHQ4 379 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 EFCAB14O75071 495 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 CALM1P0DP23 149 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 CALM2P0DP24 149 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 CALM3P0DP25 149 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 CREB3L3Q68CJ9 461 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 ASB2Q96Q27 587 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 RTEL1Q9NZ71 1219 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 EMSYQ7Z589 1322 aa20.44■□□□□ 0.86
GPC1-203ENST00000425056 C17orf102A2RUQ5 167 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 RFXAPO00287 272 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 SMIM10L2AP0DMW4 78 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 SMIM10L2BP0DMW5 78 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 CYFIP1Q7L576 1253 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 GPR20Q99678 358 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 SENP7Q9BQF6 1050 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 CERS4Q9HA82 394 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 ANO2Q9NQ90 1003 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 MTCH2Q9Y6C9 303 aa20.43■□□□□ 0.86
GPC1-203ENST00000425056 LCHNA4D1U4 455 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 GTPBP6O43824 516 aaPredicted RBP20.42■□□□□ 0.86
GPC1-203ENST00000425056 LGR5O75473 907 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 GJB5O95377 273 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 RXRAP19793 462 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 MRPS5P82675 430 aaKnown RBP20.42■□□□□ 0.86
GPC1-203ENST00000425056 IKBKEQ14164 716 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 BMP2KLQ5H9B9 411 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 TMCO2Q7Z6W1 182 aaPredicted RBP20.42■□□□□ 0.86
GPC1-203ENST00000425056 CMTR1Q8N1G2 835 aaKnown RBP20.42■□□□□ 0.86
GPC1-203ENST00000425056 MICALL1Q8N3F8 863 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 ARNTL2Q8WYA1 636 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 ATP6V0A1Q93050 837 aa20.42■□□□□ 0.86
GPC1-203ENST00000425056 SIP14410 1827 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 CAND2O75155 1236 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 THPOP40225 353 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 MKRN4PQ13434 485 aaPredicted RBP20.41■□□□□ 0.86
GPC1-203ENST00000425056 TMTC3Q6ZXV5 915 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 SGMS1Q86VZ5 419 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 TRIM50Q86XT4 487 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 ZBED2Q9BTP6 218 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 TSPYL2Q9H2G4 693 aaPredicted RBP20.41■□□□□ 0.86
GPC1-203ENST00000425056 SLC12A7Q9Y666 1083 aa20.41■□□□□ 0.86
GPC1-203ENST00000425056 RSPH10B2B2RC85 870 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 RSPH10BP0C881 870 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 SPRED2Q7Z698 418 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 NLRX1Q86UT6 975 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 GPRASP2Q96D09 838 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 RAD9AQ99638 391 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 LRRC2Q9BYS8 371 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 RNPEPQ9H4A4 650 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 PSTPIP2Q9H939 334 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 ZNF215Q9UL58 517 aaPredicted RBP20.4■□□□□ 0.86
GPC1-203ENST00000425056 TELO2Q9Y4R8 837 aa20.4■□□□□ 0.86
GPC1-203ENST00000425056 TREHO43280 583 aa20.39■□□□□ 0.85
GPC1-203ENST00000425056 MICU3Q86XE3 530 aa20.39■□□□□ 0.85
GPC1-203ENST00000425056 RAB11FIP4Q86YS3 637 aa20.39■□□□□ 0.85
GPC1-203ENST00000425056 FANCBQ8NB91 859 aa20.39■□□□□ 0.85
GPC1-203ENST00000425056 GIMAP8Q8ND71 665 aaPredicted RBP20.39■□□□□ 0.85
GPC1-203ENST00000425056 CDHR1Q96JP9 859 aa20.39■□□□□ 0.85
GPC1-203ENST00000425056 KAT6AQ92794 2004 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 RBAK-RBAKDNI3L0D1 243 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 TNFRSF10AO00220 468 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 LPXNO60711 386 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 GNAT1P11488 350 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 KCNA2P16389 499 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 ADAM17P78536 824 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 GRB10Q13322 594 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 PLEKHG4Q58EX7 1191 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 RNF20Q5VTR2 975 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 KRT40Q6A162 431 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 DBF4BQ8NFT6 615 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 NCOR1O75376 2440 aa20.38■□□□□ 0.85
GPC1-203ENST00000425056 CNTNAP5Q8WYK1 1306 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 hCG_1642624A0A1W2PR95 340 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 ITGB5P18084 799 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 SP4Q02446 784 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 UBE2SQ16763 222 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 CENPQQ7L2Z9 268 aaPredicted RBP20.37■□□□□ 0.85
GPC1-203ENST00000425056 LMBR1Q8WVP7 490 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 SETD4Q9NVD3 440 aa20.37■□□□□ 0.85
GPC1-203ENST00000425056 COL4A6Q14031 1691 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 LINC01553A4QN01 128 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 CTSHP09668 335 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 TCF7P36402 384 aaPredicted RBP20.36■□□□□ 0.85
GPC1-203ENST00000425056 SKIV2LQ15477 1246 aaKnown RBP20.36■□□□□ 0.85
GPC1-203ENST00000425056 UTP14CQ5TAP6 766 aaKnown RBP20.36■□□□□ 0.85
GPC1-203ENST00000425056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.36■□□□□ 0.85
GPC1-203ENST00000425056 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms