RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 NEDD9Q14511 834 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 XRRA1Q6P2D8 792 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 LRRC8DQ7L1W4 858 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 SGMS1Q86VZ5 419 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 CMTR1Q8N1G2 835 aaKnown RBP10.87□□□□□ -0.67
NUP50-205ENST00000419387 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 SLC9A7Q96T83 725 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
NUP50-205ENST00000419387 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
NUP50-205ENST00000419387 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 H3BRB1 525 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 FIBPO43427 364 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
NUP50-205ENST00000419387 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 GPNMBQ14956 572 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 PPP2R2DQ66LE6 453 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 CYFIP1Q7L576 1253 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 NEK1Q96PY6 1258 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 USP26Q9BXU7 913 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 TUT1Q9H6E5 874 aaKnown RBP10.86□□□□□ -0.67
NUP50-205ENST00000419387 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
NUP50-205ENST00000419387 hCG_1642624A0A1W2PR95 340 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 C17orf102A2RUQ5 167 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 KIF28PB7ZC32 967 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
NUP50-205ENST00000419387 NBNO60934 754 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 CXCL10P02778 98 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 LGALS2P05162 132 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 IGFBP4P22692 258 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
NUP50-205ENST00000419387 HIC1Q14526 733 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 TRIM71Q2Q1W2 868 aaKnown RBP10.85□□□□□ -0.67
NUP50-205ENST00000419387 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 METTL7BQ6UX53 244 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 TMTC3Q6ZXV5 915 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
NUP50-205ENST00000419387 HERC6Q8IVU3 1022 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 GPR20Q99678 358 aa10.85□□□□□ -0.67
NUP50-205ENST00000419387 TRIP12Q14669 1992 aaPredicted RBP10.85□□□□□ -0.67
NUP50-205ENST00000419387 CDC45O75419 566 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 CA3P07451 260 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 KCNJ6P48051 423 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 CNKSR3Q6P9H4 555 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 APOA5Q6Q788 366 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 SERINC5Q86VE9 423 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 GIMAP8Q8ND71 665 aaPredicted RBP10.84□□□□□ -0.67
NUP50-205ENST00000419387 ATP6V0A1Q93050 837 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 WNT8BQ93098 351 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 GPRASP2Q96D09 838 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
NUP50-205ENST00000419387 CDH23Q9H251 3354 aa10.84□□□□□ -0.67
NUP50-205ENST00000419387 GBF1Q92538 1859 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 ABHD14A-ACY1A0A1B0GW23 586 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 RSPH10B2B2RC85 870 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 TREHO43280 583 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 NEFLP07196 543 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 RSPH10BP0C881 870 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 SMIM10L2AP0DMW4 78 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 SMIM10L2BP0DMW5 78 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 GNAT1P11488 350 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 HOXC8P31273 242 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 THPOP40225 353 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 NUBP1P53384 320 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 WDR5P61964 334 aaKnown RBP10.83□□□□□ -0.68
NUP50-205ENST00000419387 IKBKEQ14164 716 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 KRT32Q14532 448 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 UBE2SQ16763 222 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 ADCK5Q3MIX3 580 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 UTP14CQ5TAP6 766 aaKnown RBP10.83□□□□□ -0.68
NUP50-205ENST00000419387 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 TET1Q8NFU7 2136 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 CDHR1Q96JP9 859 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 TCEANC2Q96MN5 208 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 PCDHA6Q9UN73 950 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 PCDHA8Q9Y5H6 950 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 UBIAD1Q9Y5Z9 338 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 MYO9BQ13459 2157 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
NUP50-205ENST00000419387 MAFGO15525 162 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms