RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SSTR3P32745 418 aaPredicted RBP17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 GRM4Q14833 912 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 TCTN1Q2MV58 587 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 SMARCC2Q8TAQ2 1214 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 C17orf80Q9BSJ5 609 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 C16orf70Q9BSU1 422 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 EPHX3Q9H6B9 360 aa17.99■□□□□ 0.47
SBDSP1-201ENST00000415772 TET1Q8NFU7 2136 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 CAND2O75155 1236 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 SP2Q02086 613 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 SP4Q02446 784 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 MBTPS1Q14703 1052 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 PLEKHG4Q58EX7 1191 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 CYFIP1Q7L576 1253 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 NCOA7Q8NI08 942 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 RIOX1Q9H6W3 641 aa17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 PRRC2BQ5JSZ5 2229 aaKnown RBP17.98■□□□□ 0.47
SBDSP1-201ENST00000415772 TREHO43280 583 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 FIBPO43427 364 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 TIGD5Q53EQ6 642 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 TRAF7Q6Q0C0 670 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 NLRX1Q86UT6 975 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 APBB2Q92870 758 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 GPKOWQ92917 476 aaPredicted RBP eCLIP17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 IFIH1Q9BYX4 1025 aaKnown RBP17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 RNPEPQ9H4A4 650 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 FAM50BQ9Y247 325 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 SIP14410 1827 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 TRANK1O15050 2925 aa17.97■□□□□ 0.47
SBDSP1-201ENST00000415772 ARHGAP4P98171 946 aa17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 GPM6BQ13491 265 aa17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 METTL7BQ6UX53 244 aa17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 SETD4Q9NVD3 440 aa17.96■□□□□ 0.47
SBDSP1-201ENST00000415772 KIF5BP33176 963 aa17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 HTRA4P83105 476 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 HIC1Q14526 733 aa17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 PUS10Q3MIT2 529 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 PTCRAQ6ISU1 281 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 RSPH3Q86UC2 560 aa17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 GIMAP8Q8ND71 665 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-201ENST00000415772 MUC3AQ02505 3323 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 XIRP2A4UGR9 3374 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 FAM86C2PA6NEL3 165 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 SPATA31C2B4DYI2 1134 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 CYP21A2P08686 494 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 ICAM3P32942 547 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 GJD3Q8N144 294 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 FIBCD1Q8N539 461 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 TOP1MTQ969P6 601 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 INPP4AQ96PE3 977 aaPredicted RBP17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 GPR20Q99678 358 aa17.94■□□□□ 0.46
SBDSP1-201ENST00000415772 REV3LO60673 3130 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 E7EWF7 191 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 MRPS9P82933 396 aaKnown RBP17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 TTC22Q5TAA0 569 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 XRRA1Q6P2D8 792 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 TRIM50Q86XT4 487 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 TMEM192Q8IY95 271 aa17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 SP7Q8TDD2 431 aaPredicted RBP17.93■□□□□ 0.46
SBDSP1-201ENST00000415772 H3BNC9 293 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 CYTH3O43739 400 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 GPR37L1O60883 481 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 CTNNB1P35222 781 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 TROAPQ12815 778 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 PCNX4Q63HM2 1172 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 FAM178BQ8IXR5 827 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 IL25Q9H293 177 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 NSUN3Q9H649 340 aaKnown RBP17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 NRCAMQ92823 1304 aa17.92■□□□□ 0.46
SBDSP1-201ENST00000415772 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 PI4K2BG5E9Z4 385 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 H3BQ06 376 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 ALADP13716 330 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 IL9P15248 144 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 TCF7P36402 384 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 GNAQP50148 359 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 PTH1RQ03431 593 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 USP17L6PQ6QN14 398 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 LMBR1Q8WVP7 490 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 GLG1Q92896 1179 aa17.91■□□□□ 0.46
SBDSP1-201ENST00000415772 SENP7Q9BQF6 1050 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 462.9 ms