RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 LRRC63Q05C16 580 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 ZCWPW2Q504Y3 356 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 CYP26C1Q6V0L0 522 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
LRCH3-202ENST00000414675 FEM1BQ9UK73 627 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 UTRNP46939 3433 aa17.09■□□□□ 0.33
LRCH3-202ENST00000414675 ABL1P00519 1130 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 CYP4A11Q02928 519 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.33
LRCH3-202ENST00000414675 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 WDR59Q6PJI9 974 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 LDHDQ86WU2 507 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 DNAJC7Q99615 494 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.33
LRCH3-202ENST00000414675 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.33
LRCH3-202ENST00000414675 RBBP6Q7Z6E9 1792 aaKnown RBP17.08■□□□□ 0.32
LRCH3-202ENST00000414675 URI1O94763 535 aaPredicted RBP17.08■□□□□ 0.32
LRCH3-202ENST00000414675 ERCC3P19447 782 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 PTGER2P43116 358 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 RASSF7Q02833 373 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 TNIP1Q15025 636 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 OR8K1Q8NGG5 319 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 FEZ1Q99689 392 aa17.08■□□□□ 0.32
LRCH3-202ENST00000414675 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 POLD1P28340 1107 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 HERC4Q5GLZ8 1057 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-202ENST00000414675 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 AGBL1Q96MI9 1066 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 RGL1Q9NZL6 768 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 BCS1LQ9Y276 419 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
LRCH3-202ENST00000414675 ZNF536O15090 1300 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-202ENST00000414675 TRAF1Q13077 416 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 NELFCDQ8IXH7 590 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 SCFD1Q8WVM8 642 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
LRCH3-202ENST00000414675 SGIP1Q9BQI5 828 aa17.07■□□□□ 0.32
LRCH3-202ENST00000414675 REXO2Q9Y3B8 237 aaKnown RBP17.07■□□□□ 0.32
LRCH3-202ENST00000414675 CASQ1P31415 396 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 GIT2Q14161 759 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
LRCH3-202ENST00000414675 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 SYT2Q8N9I0 419 aaPredicted RBP17.06■□□□□ 0.32
LRCH3-202ENST00000414675 NDST4Q9H3R1 872 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
LRCH3-202ENST00000414675 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
LRCH3-202ENST00000414675 TRIM21P19474 475 aaKnown RBP17.05■□□□□ 0.32
LRCH3-202ENST00000414675 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
LRCH3-202ENST00000414675 ARHGAP25P42331 645 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 ELF2Q15723 593 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 MAN2A1Q16706 1144 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 ABCB11O95342 1321 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 EPHB6O15197 1021 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 PSMD10O75832 226 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 CASP5P51878 434 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 FOXR2Q6PJQ5 311 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 PCMTD1Q96MG8 357 aaPredicted RBP17.05■□□□□ 0.32
LRCH3-202ENST00000414675 TSG101Q99816 390 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 POLD4Q9HCU8 107 aa17.05■□□□□ 0.32
LRCH3-202ENST00000414675 CHMP2AO43633 222 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 MEA1Q16626 185 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 SLC5A5Q92911 643 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 BHMT2Q9H2M3 363 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 CGNQ9P2M7 1197 aaKnown RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 CCPG1Q9ULG6 757 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 TRAF5O00463 557 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 NDUFA10O95299 355 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 ICAM1P05362 532 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 ARP10275 920 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 LRCH2Q5VUJ6 765 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms