RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CAPN2P17655 700 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 XBP1P17861 261 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 KRT2P35908 639 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 ZNF76P36508 570 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 MCM2P49736 904 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 RTP1P59025 263 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 CHMP4BP1P59074 171 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 PURAQ00577 322 aaKnown RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 ITGB3BPQ13352 177 aaPredicted RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 SNX17Q15036 470 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 INF2Q27J81 1249 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 CEP55Q53EZ4 464 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 XRRA1Q6P2D8 792 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 PIK3AP1Q6ZUJ8 805 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 CYFIP1Q7L576 1253 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 PLA2G4DQ86XP0 818 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 DHX37Q8IY37 1157 aaKnown RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 DIS3L2Q8IYB7 885 aaKnown RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 TNFRSF25Q93038 417 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 GJA10Q969M2 543 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 GPRASP2Q96D09 838 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 C8orf76Q96K31 380 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 GLT1D1Q96MS3 346 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 HTATIP2Q9BUP3 242 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 MLXIPQ9HAP2 919 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 AGO4Q9HCK5 861 aaKnown RBP8.79□□□□□ -1
CPSF4-202ENST00000412686 KCNH7Q9NS40 1196 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 ATP11BQ9Y2G3 1177 aa8.79□□□□□ -1
CPSF4-202ENST00000412686 MEIS1O00470 390 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 PQBP1O60828 265 aaKnown RBP8.78□□□□□ -1
CPSF4-202ENST00000412686 TGFB3P10600 412 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 SYN1P17600 705 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 GJB2P29033 226 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 CPT1AP50416 773 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 HMGN5P82970 282 aaKnown RBP8.78□□□□□ -1
CPSF4-202ENST00000412686 LAMC2Q13753 1193 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 NONOQ15233 471 aaKnown RBP eCLIP8.78□□□□□ -1
CPSF4-202ENST00000412686 PRR16Q569H4 304 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 GALNT17Q6IS24 598 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 KCNV1Q6PIU1 500 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 METTL7BQ6UX53 244 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 TRIM50Q86XT4 487 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 TEX2Q8IWB9 1127 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 PPTC7Q8NI37 304 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 KAT2BQ92831 832 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
CPSF4-202ENST00000412686 VTI1AQ96AJ9 217 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 LENG9Q96B70 501 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 SPATA33Q96N06 139 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 GPR20Q99678 358 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 ZMYND8Q9ULU4 1186 aaPredicted RBP8.78□□□□□ -1
CPSF4-202ENST00000412686 SCN10AQ9Y5Y9 1956 aa8.78□□□□□ -1
CPSF4-202ENST00000412686 LTBP2Q14767 1821 aa8.77□□□□□ -1
CPSF4-202ENST00000412686 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 CCDC194A0A1B0GVG4 234 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 GSTTP1A0A1W2PQM5 241 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 KIF28PB7ZC32 967 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 H0YGN5 161 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 NOP56O00567 594 aaKnown RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 SLC37A4O43826 429 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 ZEB2O60315 1214 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 EVI5O60447 810 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 LGALS2P05162 132 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 CIITAP33076 1130 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 TLE2Q04725 743 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 CUL4AQ13619 759 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 ITGA7Q13683 1181 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 TRIM29Q14134 588 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 NEDD9Q14511 834 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 LETM2Q2VYF4 491 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 FAM177A1Q8N128 213 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 SENP7Q9BQF6 1050 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 MTG1Q9BT17 334 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-202ENST00000412686 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 ELP1O95163 1332 aa8.77□□□□□ -1.01
CPSF4-202ENST00000412686 ARVCFO00192 962 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 MSH4O15457 936 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 DHX15O43143 795 aaKnown RBP8.76□□□□□ -1.01
CPSF4-202ENST00000412686 B4GALT4O60513 344 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 CCNE2O96020 404 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 F2P00734 622 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 HOXD8P13378 290 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-202ENST00000412686 ATP2B1P20020 1258 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 TCF7P36402 384 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-202ENST00000412686 CDK7P50613 346 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 USP11P51784 963 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 HIC1Q14526 733 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 DGKDQ16760 1214 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 BRDTQ58F21 947 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-202ENST00000412686 FAM47CQ5HY64 1035 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 MCTP2Q6DN12 878 aa8.76□□□□□ -1.01
CPSF4-202ENST00000412686 NIPA1Q7RTP0 329 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms