RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 P2RX7Q99572 595 aaKnown RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 TANGO6Q9C0B7 1094 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 PCDHA1Q9Y5I3 950 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 NPHP3-ACAD11A0A0J9YXS1 232 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 FRMD3A2A2Y4 597 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 MEIS2O14770 477 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 SSBP05455 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
HOXD3-202ENST00000410016 EEF2P13639 858 aaKnown RBP17.56■□□□□ 0.4
HOXD3-202ENST00000410016 ARSHQ5FYA8 562 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 TRIM59Q8IWR1 403 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 MMGT1Q8N4V1 131 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 SYN2Q92777 582 aaPredicted RBP17.56■□□□□ 0.4
HOXD3-202ENST00000410016 GLT8D2Q9H1C3 349 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 MED4Q9NPJ6 270 aa17.56■□□□□ 0.4
HOXD3-202ENST00000410016 SYF2O95926 243 aaKnown RBP17.55■□□□□ 0.4
HOXD3-202ENST00000410016 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 FAM83BQ5T0W9 1011 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 CCDC65Q8IXS2 484 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 ZC3H3Q8IXZ2 948 aaKnown RBP17.55■□□□□ 0.4
HOXD3-202ENST00000410016 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 CEP72Q9P209 647 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 SLC26A4O43511 780 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 MED24O75448 989 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 CRKP46108 304 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 LMAN1P49257 510 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 SLC12A3P55017 1021 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 HERC4Q5GLZ8 1057 aaPredicted RBP17.55■□□□□ 0.4
HOXD3-202ENST00000410016 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 OSBPL9Q96SU4 736 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 ANO3Q9BYT9 981 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 NLRC4Q9NPP4 1024 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 KCNQ5Q9NR82 932 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
HOXD3-202ENST00000410016 GNA14O95837 355 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 STAT3P40763 770 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 SLC1A4P43007 532 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
HOXD3-202ENST00000410016 CCDC40Q4G0X9 1142 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 MUM1L1Q5H9M0 696 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 GPBP1Q86WP2 473 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 NELFCDQ8IXH7 590 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 SPATA4Q8NEY3 305 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 PCDHAC2Q9Y5I4 1007 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
HOXD3-202ENST00000410016 FAM196BA6NMK8 535 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 RASSF7Q02833 373 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
HOXD3-202ENST00000410016 HSP90B2PQ58FF3 399 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 IQCEQ6IPM2 695 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 MOXD1Q6UVY6 613 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 ETNPPLQ8TBG4 499 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 DCAF4Q8WV16 495 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 TLR10Q9BXR5 811 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 NUCKS1Q9H1E3 243 aaKnown RBP17.54■□□□□ 0.4
HOXD3-202ENST00000410016 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
HOXD3-202ENST00000410016 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 PHACTR2O75167 634 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 NPR1P16066 1061 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 TCP1P17987 556 aaKnown RBP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 CACNB3P54284 484 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 APBA1Q02410 837 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 SLFN13Q68D06 897 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 RNF10Q8N5U6 811 aaKnown RBP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 HDAC7Q8WUI4 952 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 AFF2P51816 1311 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 RAD51AP2Q09MP3 1159 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 ZSCAN26Q16670 478 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 SLC9C1Q4G0N8 1177 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 KLHDC7AQ5VTJ3 777 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 CATSPER3Q86XQ3 398 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 SLFN12Q8IYM2 578 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 ALS2CR12Q96Q35 445 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 CRACR2AQ9BSW2 395 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 LRRC1Q9BTT6 524 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.4
HOXD3-202ENST00000410016 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
HOXD3-202ENST00000410016 POTEFA5A3E0 1075 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 PRPF6O94906 941 aaKnown RBP17.52■□□□□ 0.4
HOXD3-202ENST00000410016 SERPING1P05155 500 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 POTEIP0CG38 1075 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 CXCR5P32302 372 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 POLR2FP61218 127 aaKnown RBP17.52■□□□□ 0.4
HOXD3-202ENST00000410016 ARHGAP4P98171 946 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 TCP10Q12799 353 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms