RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LUZP4Q9P127 313 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 PHTF1Q9UMS5 762 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 PPP2R3BQ9Y5P8 575 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 KLRG2A4D1S0 409 aaPredicted RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 GLRX3O76003 335 aaKnown RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 KCNH1O95259 989 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 PAPLNO95428 1278 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 CBX7O95931 251 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 CFBP00751 764 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 ASGR2P07307 311 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 RBP3P10745 1247 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 HOXC12P31275 282 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 KCNJ6P48051 423 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 FZD5Q13467 585 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 GALEQ14376 348 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 KRT72Q14CN4 511 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 SF1Q15637 639 aaKnown RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 ALFQ53S48 1182 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 WASHC2AQ641Q2 1341 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 GTF2IRD2BQ6EKJ0 949 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 STYK1Q6J9G0 422 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 CCDC70Q6NSX1 233 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 GTF2IRD2Q86UP8 949 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 C11orf74Q86VG3 221 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 CMTR2Q8IYT2 770 aaKnown RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 C1orf162Q8NEQ5 155 aaPredicted RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 VPS37AQ8NEZ2 397 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 HSPBAP1Q96EW2 488 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 GPR101Q96P66 508 aaPredicted RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 ASPNQ9BXN1 380 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 EMC7Q9NPA0 242 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 NGRNQ9NPE2 291 aaKnown RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 CGGBP1Q9UFW8 167 aaPredicted RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 DDX20Q9UHI6 824 aaKnown RBP6.12□□□□□ -1.43
LSM5-205ENST00000409952 ZKSCAN5Q9Y2L8 839 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 TRAF6Q9Y4K3 522 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 PCDHA9Q9Y5H5 950 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
LSM5-205ENST00000409952 ASXL2Q76L83 1435 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 A0A087WZG4 1122 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 H3BS24 57 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 SHOXO15266 292 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 PMM2O15305 246 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 ESR1P03372 595 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 SCG5P05408 212 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
LSM5-205ENST00000409952 KCNA6P17658 529 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 HALP42357 657 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 PPM1FP49593 454 aaPredicted RBP6.11□□□□□ -1.43
LSM5-205ENST00000409952 SESN3P58005 492 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 GUCY1A3Q02108 690 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 IKZF1Q13422 519 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 EFCAB2Q5VUJ9 269 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 CDKAL1Q5VV42 579 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 CYB5RLQ6IPT4 315 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 ABHD17CQ6PCB6 329 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 USP53Q70EK8 1073 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
LSM5-205ENST00000409952 TMEM145Q8NBT3 493 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 FLAD1Q8NFF5 587 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 BRF1Q92994 677 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 C1orf159Q96HA4 380 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 FAXDC2Q96IV6 333 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 NKX2-4Q9H2Z4 354 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 ZHX3Q9H4I2 956 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 GP6Q9HCN6 339 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 VTA1Q9NP79 307 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 CYP26B1Q9NR63 512 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 KLHL11Q9NVR0 708 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 SAP30BPQ9UHR5 308 aaKnown RBP6.11□□□□□ -1.43
LSM5-205ENST00000409952 GTF2A1LQ9UNN4 478 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
LSM5-205ENST00000409952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.1□□□□□ -1.43
LSM5-205ENST00000409952 IL33O95760 270 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 CPP00450 1065 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 HSPA6P17066 643 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 RBM10P98175 930 aaKnown RBP6.1□□□□□ -1.43
LSM5-205ENST00000409952 ZP2Q05996 745 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 ADCY1Q08828 1119 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 CHAF1AQ13111 956 aaPredicted RBP6.1□□□□□ -1.43
LSM5-205ENST00000409952 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 CABP5Q9NP86 173 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 NMRK2Q9NPI5 230 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 NLRC4Q9NPP4 1024 aa6.1□□□□□ -1.43
LSM5-205ENST00000409952 THG1LQ9NWX6 298 aaKnown RBP6.1□□□□□ -1.43
LSM5-205ENST00000409952 LRRN2O75325 713 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 TYRP1P17643 537 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 RNF4P78317 190 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 STK3Q13188 491 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms