RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 IFT81Q8WYA0 676 aa18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 PPM1KQ8N3J5 372 aa18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 KCTD17Q8N5Z5 321 aa18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 U2AF1L4Q8WU68 220 aaKnown RBP18.34■□□□□ 0.53
PCDHA13-202ENST00000409494 ZBTB24O43167 697 aaPredicted RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 CCDC127Q96BQ5 260 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 RAB17Q9H0T7 212 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 DLATP10515 647 aaKnown RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 TCP1P17987 556 aaKnown RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 C11orf57Q6ZUT1 292 aaPredicted RBP18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 MB21D1Q8N884 522 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 MMS19Q96T76 1030 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 MTFR1LQ9H019 292 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 PPP2R2CQ9Y2T4 447 aa18.33■□□□□ 0.53
PCDHA13-202ENST00000409494 ZNF233A6NK53 670 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 CEP104O60308 925 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 RNF8O76064 485 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 STAT3P40763 770 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 ELMSAN1Q6PJG2 1045 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 SARNPP82979 210 aaKnown RBP18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 ARHGAP4P98171 946 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 UBE2SQ16763 222 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 RUNDC3BQ96NL0 473 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 MED10Q9BTT4 135 aa18.33■□□□□ 0.52
PCDHA13-202ENST00000409494 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 A0A0G2JLW4 131 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 NSFP46459 744 aaKnown RBP18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 UBXN2AP68543 259 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 TEX2Q8IWB9 1127 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 PDLIM2Q96JY6 352 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 LRFN2Q9ULH4 789 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 ATP8B3O60423 1300 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 FCER1AP12319 257 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 TNFAIP2Q03169 654 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 COG2Q14746 738 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 C10orf76Q5T2E6 689 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 GRK7Q8WTQ7 553 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 K7ERI5 159 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 PLCG1P19174 1290 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 MAP7D3Q8IWC1 876 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 C2orf40Q9H1Z8 148 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 ANKFY1Q9P2R3 1169 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 CAPN9O14815 690 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 MED7O43513 233 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 RASA3Q14644 834 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 QRICH1Q2TAL8 776 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 UNC13DQ70J99 1090 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 PROM2Q8N271 834 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 MTMR4Q9NYA4 1195 aa18.32■□□□□ 0.52
PCDHA13-202ENST00000409494 EFCAB8A8MWE9 144 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MYO1EQ12965 1108 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 PAK2Q13177 524 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 WHAMMP3Q1A5X7 153 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 ST7Q9NRC1 585 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MYO1AQ9UBC5 1043 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 FLT1P17948 1338 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 GBP1P32455 592 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MTMR3Q13615 1198 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 SCARF1Q14162 830 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 DNAJC21Q5F1R6 531 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 THAP12O43422 761 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 POLR2FP61218 127 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 DPCR1Q3MIW9 517 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MEGF6O75095 1541 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 STAM2O75886 525 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 P4HBP07237 508 aaKnown RBP18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
PCDHA13-202ENST00000409494 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 CDC42EP1Q00587 391 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 BRD3Q15059 726 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 RUFY4Q6ZNE9 571 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 TTC16Q8NEE8 873 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 COL5A2P05997 1499 aaPredicted RBP18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 GYS1P13807 737 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 ZNF827Q17R98 1081 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 RESP18Q5W5W9 173 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 C10orf67Q8IYJ2 551 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 HYOU1Q9Y4L1 999 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms