RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 MIIPQ5JXC2 388 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 LRRC34Q8IZ02 419 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SPICE1Q8N0Z3 855 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 STAG2Q8N3U4 1231 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 PGM2Q96G03 612 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 DENND2AQ9ULE3 1009 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 C2CD2Q9Y426 696 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 AFDNP55196 1824 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 CCDC169A6NNP5 214 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 BAG3O95817 575 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 GSTA2P09210 222 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ACADSP16219 412 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 CCNE1P24864 410 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 KLC1Q07866 573 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ZNF174Q15697 407 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ALX1Q15699 326 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 NAB2Q15742 525 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ASTE1Q2TB18 679 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 CCDC152Q4G0S7 254 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ARL6IP4Q66PJ3 421 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 TRIM68Q6AZZ1 485 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ANO7Q6IWH7 933 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SESTD1Q86VW0 696 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 MIPOL1Q8TD10 442 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ACTRT1Q8TDG2 376 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 PRCCQ92733 491 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 P2RX5Q93086 422 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SELENOSQ9BQE4 189 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ABCF3Q9NUQ8 709 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 INTS9Q9NV88 658 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SALL4Q9UJQ4 1053 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 USP15Q9Y4E8 981 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 DCDC2CA8MYV0 355 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ADD2P35612 726 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 PPP1R15BQ5SWA1 713 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 NUGGCQ68CJ6 796 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 MDM1Q8TC05 714 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SCFD2Q8WU76 684 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SLITRK6Q9H5Y7 841 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 SUDS3Q9H7L9 328 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 LMCD1Q9NZU5 365 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 FBXO3Q9UK99 471 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 LAMB4A4D0S4 1761 aa6.38□□□□□ -1.39
R3HDM1-202ENST00000409478 ABCB11O95342 1321 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 LRRC53A6NM62 1247 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SNX3O60493 162 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 OAS1P00973 400 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 KRT16P08779 473 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 NUDT17P0C025 328 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 DHX9Q08211 1270 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 HHATQ5VTY9 493 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 NCAPG2Q86XI2 1143 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 DZIP3Q86Y13 1208 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 FANCBQ8NB91 859 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 CFAP61Q8NHU2 1237 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 PNMA2Q9UL42 364 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 STK38LQ9Y2H1 464 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 UTP11Q9Y3A2 253 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 MYH13Q9UKX3 1938 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 CREB3O43889 395 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 AGTP01019 485 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 GNAZP19086 355 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 PDE6BP35913 854 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SLC1A4P43007 532 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 ZAP70P43403 619 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 GFPT1Q06210 699 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 RPS6KA1Q15418 735 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SLC9C1Q4G0N8 1177 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 VWA3BQ502W6 1294 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 ASRGL1Q7L266 308 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 RRAGAQ7L523 313 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 ANKRD13CQ8N6S4 541 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 ATL2Q8NHH9 583 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SEC14L1Q92503 715 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SYN2Q92777 582 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 DUSP9Q99956 384 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 MAGEF1Q9HAY2 307 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 DISC1Q9NRI5 854 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SIK3Q9Y2K2 1263 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SIPA1L3O60292 1781 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 TMEM2Q9UHN6 1383 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 MARF1Q9Y4F3 1742 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 PGRMC1O00264 195 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 FGFR1OPO95684 399 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 FTCDO95954 541 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 CALB2P22676 271 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 SH3BGRP55822 239 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 EHHADHQ08426 723 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 LRRC24Q50LG9 513 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 TAOK1Q7L7X3 1001 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 PRMT1Q99873 361 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 RXFP1Q9HBX9 757 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 CTTNBP2NLQ9P2B4 639 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 RTL9Q8NET4 1388 aa6.37□□□□□ -1.39
R3HDM1-202ENST00000409478 FAM205CA6NFA0 338 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms