RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GLT8D2Q9H1C3 349 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 PCDHA2Q9Y5H9 948 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 EGFRP00533 1210 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 CASP5P51878 434 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 SLC12A3P55017 1021 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 FAM114A1Q8IWE2 563 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 EPN1Q9Y6I3 576 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 RBBP6Q7Z6E9 1792 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-202ENST00000409472 KIF5CO60282 957 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 H2AFXP16104 143 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 DGKZQ13574 1117 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 WDR18Q9BV38 432 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 VAV3Q9UKW4 847 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 RCCD1A6NED2 376 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 EML1O00423 815 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 CFBP00751 764 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 PPP1R2P41236 205 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 Q4G0T1 1027 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 RTKN2Q8IZC4 609 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 MYOCDQ8IZQ8 938 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 OGFOD1Q8N543 542 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 NDST4Q9H3R1 872 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
SCAMP4-202ENST00000409472 IGLV3-22A0A075B6J6 115 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 MEA1Q16626 185 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 MOXD1Q6UVY6 613 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 FAM53CQ9NYF3 392 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 CLCN6P51797 869 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 LRRC63Q05C16 580 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 CXCL9Q07325 125 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 UBXN4Q92575 508 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 RGL1Q9NZL6 768 aa16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 FEZ2Q9UHY8 353 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-202ENST00000409472 POLD1P28340 1107 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 APBA1Q02410 837 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 TEX35Q5T0J7 233 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 SMCR8Q8TEV9 937 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 GUCA1BQ9UMX6 200 aa16.83■□□□□ 0.28
SCAMP4-202ENST00000409472 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 CYP27A1Q02318 531 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 MAN2A1Q16706 1144 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 WNT10BO00744 389 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 ZNF263O14978 683 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 CIITAP33076 1130 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 CYP2C19P33261 490 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 ZBED6P86452 979 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 PSMD2Q13200 908 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 KIF4BQ2VIQ3 1234 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 FKBP15Q5T1M5 1219 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 LACRTQ9GZZ8 138 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 NHEJ1Q9H9Q4 299 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
SCAMP4-202ENST00000409472 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 TRAF5O00463 557 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 CHMP2AO43633 222 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 HAUS3Q68CZ6 603 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 RSRC2Q7L4I2 434 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 RUSC1Q9BVN2 902 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 LRRC27Q9C0I9 530 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 KCTD10Q9H3F6 313 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 VCPKMTQ9H867 229 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 ASTN2O75129 1339 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 FRMD3A2A2Y4 597 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 ZBTB39O15060 712 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 FOSP01100 380 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 GIT2Q14161 759 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 MMRN2Q9H8L6 949 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 GEMIN8Q9NWZ8 242 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 DUSP10Q9Y6W6 482 aa16.81■□□□□ 0.28
SCAMP4-202ENST00000409472 TBX3O15119 743 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms