RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 RRAGAQ7L523 313 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 ETNPPLQ8TBG4 499 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 BAP1Q92560 729 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 FGFBP2Q9BYJ0 223 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 PCDHA2Q9Y5H9 948 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 SCN9AQ15858 1988 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 MACROD2A1Z1Q3 448 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 MAP2K7O14733 419 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 TBX3O15119 743 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 LCA5LO95447 670 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 GNA14O95837 355 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 OAS2P29728 719 aaKnown RBP18.64■□□□□ 0.57
NUP50-203ENST00000407019 EIF4A3P38919 411 aaKnown RBP18.64■□□□□ 0.57
NUP50-203ENST00000407019 SNAP25P60880 206 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 VSNL1P62760 191 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 Q4G0T1 1027 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 PRR16Q569H4 304 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 HERC4Q5GLZ8 1057 aaPredicted RBP18.64■□□□□ 0.57
NUP50-203ENST00000407019 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 KRT26Q7Z3Y9 468 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 IFIH1Q9BYX4 1025 aaKnown RBP18.64■□□□□ 0.57
NUP50-203ENST00000407019 PCDHA13Q9Y5I0 950 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 DUSP10Q9Y6W6 482 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 ATRNL1Q5VV63 1379 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 PITPNM2Q9BZ72 1349 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 NPHP3-ACAD11A0A0J9YXS1 232 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 ENTPD3O75355 529 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 FOSP01100 380 aaPredicted RBP18.63■□□□□ 0.57
NUP50-203ENST00000407019 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
NUP50-203ENST00000407019 ERCC3P19447 782 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 SLC12A3P55017 1021 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 USH1GQ495M9 461 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 CACNA2D4Q7Z3S7 1137 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 RPGRIP1Q96KN7 1286 aa18.63■□□□□ 0.57
NUP50-203ENST00000407019 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
NUP50-203ENST00000407019 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
NUP50-203ENST00000407019 FRMD3A2A2Y4 597 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 SPDYE3A6NKU9 549 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 POLR3GO15318 223 aaPredicted RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 AKR1B10O60218 316 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 SRGAP2O75044 1071 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 SREBF1P36956 1147 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 SPIRE1Q08AE8 756 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 HDXQ7Z353 690 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 MMS19Q96T76 1030 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 ABCB6Q9NP58 842 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 POTEFA5A3E0 1075 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 POTEIP0CG38 1075 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 BMP3P12645 472 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 MMP14P50281 582 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 KCNMA1Q12791 1236 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 RBM26Q5T8P6 1007 aaKnown RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 POTEGQ6S5H5 508 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 POTEEQ6S8J3 1075 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 CCDC155Q8N6L0 562 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 TRIM58Q8NG06 486 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 SMCR8Q8TEV9 937 aaPredicted RBP18.62■□□□□ 0.57
NUP50-203ENST00000407019 SCFD1Q8WVM8 642 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
NUP50-203ENST00000407019 TACC1O75410 805 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 GH2P01242 217 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 AOC3Q16853 763 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 WDR93Q6P2C0 686 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 CAPZA3Q96KX2 299 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 KCTD10Q9H3F6 313 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 CEP72Q9P209 647 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 COL2A1P02458 1487 aaPredicted RBP18.61■□□□□ 0.57
NUP50-203ENST00000407019 USP14P54578 494 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 RAD51AP2Q09MP3 1159 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 ARSHQ5FYA8 562 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
NUP50-203ENST00000407019 CAGE1Q8TC20 777 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 LENG9Q96B70 501 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 FAM20AQ96MK3 541 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
NUP50-203ENST00000407019 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
NUP50-203ENST00000407019 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 SSU72P8A0A1W2PR75 194 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 RPA1P27694 616 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
NUP50-203ENST00000407019 TRIM59Q8IWR1 403 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 ZHX3Q9H4I2 956 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 DNM3Q9UQ16 869 aa18.6■□□□□ 0.57
NUP50-203ENST00000407019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
NUP50-203ENST00000407019 CIITAP33076 1130 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 JAG1P78504 1218 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 EDRF1Q3B7T1 1238 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms