RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 MPP1Q00013 466 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PRKG2Q13237 762 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 MAP7Q14244 749 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 ZNF460Q14592 562 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 ODF1Q14990 250 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PCBP2Q15366 365 aaKnown RBP eCLIP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 INTS11Q5TA45 600 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 VPS53Q5VIR6 699 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 TRIM42Q8IWZ5 723 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 GCC1Q96CN9 775 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 FMNL2Q96PY5 1086 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 DNM3Q9UQ16 869 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PTPN22Q9Y2R2 807 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 OVOS2A0A0G2JMS6 1433 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 OVOS2A0A0J9YW53 1432 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 OVOS2Q6IE36 1432 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 TUBGCP6Q96RT7 1819 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PNPLA7Q6ZV29 1317 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 IFT172Q9UG01 1749 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 FAM221AA4D161 298 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 GTPBP10A4D1E9 387 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 EYA2O00167 538 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 TOMM70O94826 608 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 NPTXRO95502 500 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 CNOT4O95628 575 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 LTFP02788 710 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 HNRNPCP07910 306 aaKnown RBP eCLIP5.75□□□□□ -1.493e-6■□□□□ 11
CLHC1-203ENST00000406076 HSD3B1P14060 373 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 RHCEP18577 417 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 CD33P20138 364 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 KCNQ4P56696 695 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PFKPQ01813 784 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 RHDQ02161 417 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 TNP2Q05952 138 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 CWF19L2Q2TBE0 894 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 SLC10A5Q5PT55 438 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 GJC2Q5T442 439 aaPredicted RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 NUTM2GQ5VZR2 741 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 TTBK2Q6IQ55 1244 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 CHST15Q7LFX5 561 aaPredicted RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 REXO1Q8N1G1 1221 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 C19orf47Q8N9M1 422 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 ACRBPQ8NEB7 543 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 GATAD2BQ8WXI9 593 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 USP7Q93009 1102 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 BTBD6Q96KE9 485 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 MRPL4Q9BYD3 311 aaKnown RBP5.75□□□□□ -1.49
CLHC1-203ENST00000406076 IFT22Q9H7X7 185 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 EFCC1Q9HA90 598 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 CABP1Q9NZU7 370 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 ZNF232Q9UNY5 417 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 GIT1Q9Y2X7 761 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 PARP3Q9Y6F1 533 aa5.75□□□□□ -1.49
CLHC1-203ENST00000406076 NUP155O75694 1391 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ABCC11Q96J66 1382 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 FAM170AA1A519 330 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 SMTNL1A8MU46 457 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 KHNYNO15037 678 aaKnown RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 SUSD5O60279 629 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 CPP00450 1065 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 PYGMP11217 842 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 BPIP17213 487 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TATP17735 454 aaPredicted RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 GRK6P43250 576 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TM4SF4P48230 202 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 MPP2Q14168 576 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TRIP4Q15650 581 aaPredicted RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 INAVAQ3KP66 663 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 RETSATQ6NUM9 610 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 SWSAP1Q6NVH7 229 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ALYREFQ86V81 257 aaKnown RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ARHGEF28Q8N1W1 1705 aaKnown RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 VPS8Q8N3P4 1428 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 APPL2Q8NEU8 664 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 NUP133Q8WUM0 1156 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 SH3KBP1Q96B97 665 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 AIFM3Q96NN9 605 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ZIC5Q96T25 663 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 CDC6Q99741 560 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ISCA1Q9BUE6 129 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 SLC13A1Q9BZW2 595 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 PHACTR1Q9C0D0 580 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 XPO4Q9C0E2 1151 aaKnown RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 EHD4Q9H223 541 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ANTXR1Q9H6X2 564 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TRIM39Q9HCM9 518 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TBC1D22BQ9NU19 505 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ZDHHC3Q9NYG2 299 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 ZNF652Q9Y2D9 606 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 PCDHB5Q9Y5E4 795 aa5.74□□□□□ -1.49
CLHC1-203ENST00000406076 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
CLHC1-203ENST00000406076 AATKQ6ZMQ8 1374 aa5.73□□□□□ -1.49
CLHC1-203ENST00000406076 SYNDIG1LA6NDD5 238 aa5.73□□□□□ -1.49
CLHC1-203ENST00000406076 M0R2C6 588 aa5.73□□□□□ -1.49
CLHC1-203ENST00000406076 GNB5O14775 395 aa5.73□□□□□ -1.49
CLHC1-203ENST00000406076 NCAM2O15394 837 aa5.73□□□□□ -1.49
CLHC1-203ENST00000406076 DDX3YO15523 660 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms