RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RASSF9O75901 435 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 ANXA13P27216 316 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 RAB27AP51159 221 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 R3HDM1Q15032 1099 aaKnown RBP10.8□□□□□ -0.68
PTPRM-203ENST00000400060 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 OLFML2BQ68BL8 750 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 USP37Q86T82 979 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 TGS1Q96RS0 853 aaKnown RBP10.8□□□□□ -0.68
PTPRM-203ENST00000400060 HDAC6Q9UBN7 1215 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 FBXL5Q9UKA1 691 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
PTPRM-203ENST00000400060 LAD1O00515 517 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 HGSO14964 777 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 KDM1AO60341 852 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 RANBP6O60518 1105 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 EIF4A3P38919 411 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SERPINB8P50452 374 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 IFIT1BQ5T764 474 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 OLFML1Q6UWY5 402 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SERPINI1Q99574 410 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.79□□□□□ -0.688e-7■■■□□ 15.8
PTPRM-203ENST00000400060 USP44Q9H0E7 712 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 AZI2Q9H6S1 392 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PPCSQ9HAB8 311 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 FAM207AQ9NSI2 230 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SENP1Q9P0U3 644 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SUCLA2Q9P2R7 463 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ADD3Q9UEY8 706 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 H0Y3Z8 333 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SPOPO43791 374 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 GGPS1O95749 300 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 HSPA13P48723 471 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 RAB15P59190 212 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 DSG1Q02413 1049 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 WDR60Q8WVS4 1066 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 HAUS7Q99871 368 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 SIKE1Q9BRV8 207 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 LSM14BQ9BX40 385 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PA2G4Q9UQ80 394 aaKnown RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CDK12Q9NYV4 1490 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 A0A087WWV3 80 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PHF20L1A8MW92 1017 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ATP6V1C1P21283 382 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PTPREP23469 700 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CACNA2D1P54289 1103 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 MTF1Q14872 753 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ZNF174Q15697 407 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 DNAL1Q4LDG9 190 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 XAGE3Q8WTP9 111 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 KAT2BQ92831 832 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 P2RX5Q93086 422 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 PAGE5Q96GU1 130 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 TRAF5O00463 557 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ATF2P15336 505 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CDK17Q00537 523 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ZCWPW2Q504Y3 356 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 ARHGAP27Q6ZUM4 889 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 BTBD7Q9P203 1132 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
PTPRM-203ENST00000400060 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 KRT75O95678 551 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SLC5A1P13866 664 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 HOXC9P31274 260 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 RGS2P41220 211 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 USH1GQ495M9 461 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ZNF662Q6ZS27 426 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 COPS6Q7L5N1 327 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SH3GL2Q99962 352 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 PALMDQ9NP74 551 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ZNF652Q9Y2D9 606 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 GMEB1Q9Y692 573 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ARHGEF40Q8TER5 1519 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 PLA2R1Q13018 1463 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ATP10DQ9P241 1426 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 MGRN1O60291 552 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ASPHQ12797 758 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 NDUFA5Q16718 116 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ZMYM1Q5SVZ6 1142 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 THEMIS2Q5TEJ8 643 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 BTNL9Q6UXG8 535 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms