RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 UBIAD1Q9Y5Z9 338 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 LGALS2P05162 132 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 ZNF76P36508 570 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 BFSP2Q13515 415 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 GDF6Q6KF10 455 aaPredicted RBP19.99■□□□□ 0.79
UPK3A-202ENST00000396082 REXO1Q8N1G1 1221 aaKnown RBP19.99■□□□□ 0.79
UPK3A-202ENST00000396082 CCDC155Q8N6L0 562 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 RETREG2Q8NC44 543 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.99■□□□□ 0.79
UPK3A-202ENST00000396082 ZMYND12Q9H0C1 365 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 WNT8AQ9H1J5 351 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 IL23AQ9NPF7 189 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 JADE2Q9NQC1 790 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 HDAC6Q9UBN7 1215 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 GTF2IRD1Q9UHL9 959 aa19.99■□□□□ 0.79
UPK3A-202ENST00000396082 HAS3O00219 553 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 CLK2P49760 499 aaKnown RBP19.98■□□□□ 0.79
UPK3A-202ENST00000396082 UTP14CQ5TAP6 766 aaKnown RBP19.98■□□□□ 0.79
UPK3A-202ENST00000396082 MCTP2Q6DN12 878 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 SCLYQ96I15 445 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 GPR20Q99678 358 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 MXRA8Q9BRK3 442 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
UPK3A-202ENST00000396082 VPS54Q9P1Q0 977 aa19.98■□□□□ 0.79
UPK3A-202ENST00000396082 H3BRB1 525 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 MAFGO15525 162 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 ATP9AO75110 1047 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 KCNA2P16389 499 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 SREBF1P36956 1147 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 ANKRD1Q15327 319 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 RPUSD2Q8IZ73 545 aaKnown RBP19.97■□□□□ 0.79
UPK3A-202ENST00000396082 C16orf70Q9BSU1 422 aa19.97■□□□□ 0.79
UPK3A-202ENST00000396082 MTIF3Q9H2K0 278 aaKnown RBP19.97■□□□□ 0.79
UPK3A-202ENST00000396082 TUT1Q9H6E5 874 aaKnown RBP19.97■□□□□ 0.79
UPK3A-202ENST00000396082 ZNF215Q9UL58 517 aaPredicted RBP19.97■□□□□ 0.79
UPK3A-202ENST00000396082 PITPNM1O00562 1244 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 CDKL5O76039 1030 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 DEXIO95424 95 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 ARHGAP4P98171 946 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 CEP55Q53EZ4 464 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 TMEM240Q5SV17 173 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 ZNF365Q70YC5 407 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 CAGE1Q8TC20 777 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 SDF4Q9BRK5 362 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 KCNH7Q9NS40 1196 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 TANC1Q9C0D5 1861 aa19.96■□□□□ 0.79
UPK3A-202ENST00000396082 SEC24BO95487 1268 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 FGBP02675 491 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 AK2P54819 239 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 NLRP5P59047 1200 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 C16orf59Q7L2K0 433 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 DEFB128Q7Z7B8 93 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 TRIM50Q86XT4 487 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 CYP2W1Q8TAV3 490 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 JPH1Q9HDC5 661 aaPredicted RBP19.95■□□□□ 0.78
UPK3A-202ENST00000396082 SH3GLB2Q9NR46 395 aa19.95■□□□□ 0.78
UPK3A-202ENST00000396082 TRIP12Q14669 1992 aaPredicted RBP19.95■□□□□ 0.78
UPK3A-202ENST00000396082 SMIM10L2AP0DMW4 78 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 SMIM10L2BP0DMW5 78 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 TCF7P36402 384 aaPredicted RBP19.94■□□□□ 0.78
UPK3A-202ENST00000396082 SCRN1Q12765 414 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 DEFB123Q8N688 67 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 RASGRP4Q8TDF6 673 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 SEPT1Q8WYJ6 367 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 TPCN1Q9ULQ1 816 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 TELO2Q9Y4R8 837 aa19.94■□□□□ 0.78
UPK3A-202ENST00000396082 SCN5AQ14524 2016 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 C17orf102A2RUQ5 167 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 PFKMP08237 780 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 IQCF3P0C7M6 154 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 ARP10275 920 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 RFC2P35250 354 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 NEK4P51957 841 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 SMAD3P84022 425 aaKnown RBP19.93■□□□□ 0.78
UPK3A-202ENST00000396082 ZNF697Q5TEC3 545 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 Q7L0L9 218 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 OTOP2Q7RTS6 562 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 PLA2G4DQ86XP0 818 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 AFAP1L1Q8TED9 768 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 SLC9A2Q9UBY0 812 aa19.93■□□□□ 0.78
UPK3A-202ENST00000396082 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.92■□□□□ 0.78
UPK3A-202ENST00000396082 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.92■□□□□ 0.78
UPK3A-202ENST00000396082 ADAMTS3O15072 1205 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 PFKFB2O60825 505 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 ZNF200P98182 395 aaPredicted RBP19.92■□□□□ 0.78
UPK3A-202ENST00000396082 PTK7Q13308 1070 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 HERVK_113Q902F9 699 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 GLG1Q92896 1179 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 ATP6V0A1Q93050 837 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 CTAGE1Q96RT6 745 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.78
UPK3A-202ENST00000396082 AGO4Q9HCK5 861 aaKnown RBP19.92■□□□□ 0.78
UPK3A-202ENST00000396082 NFASCO94856 1347 aa19.92■□□□□ 0.78
UPK3A-202ENST00000396082 LAMA3Q16787 3333 aa19.91■□□□□ 0.78
UPK3A-202ENST00000396082 ZBBXA8MT70 800 aa19.91■□□□□ 0.78
UPK3A-202ENST00000396082 MEIS1O00470 390 aa19.91■□□□□ 0.78
UPK3A-202ENST00000396082 CYP3A4P08684 503 aa19.91■□□□□ 0.78
UPK3A-202ENST00000396082 GNAT1P11488 350 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms