RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 CIITAP33076 1130 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 MTIF2P46199 727 aaKnown RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 GIT2Q14161 759 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 CCDC96Q2M329 555 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 LCTP09848 1927 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 PHIPQ8WWQ0 1821 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 ZBTB48P10074 688 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 MYBL2P10244 700 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 VAV2P52735 878 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 KRT79Q5XKE5 535 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 GANQ9H2C0 597 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 FAM207AQ9NSI2 230 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-202ENST00000394888 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
CPSF7-202ENST00000394888 EML1O00423 815 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 PJA2O43164 708 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 MRPL12P52815 198 aaKnown RBP17.08■□□□□ 0.33
CPSF7-202ENST00000394888 BRD3Q15059 726 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 WDR18Q9BV38 432 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.33
CPSF7-202ENST00000394888 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 AJAP1Q9UKB5 411 aaPredicted RBP17.08■□□□□ 0.33
CPSF7-202ENST00000394888 ARID2Q68CP9 1835 aa17.08■□□□□ 0.33
CPSF7-202ENST00000394888 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-202ENST00000394888 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 FAM114A1Q8IWE2 563 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 GMLQ99445 158 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-202ENST00000394888 CCDC122Q5T0U0 273 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 IKZF4Q9H2S9 585 aa17.08■□□□□ 0.32
CPSF7-202ENST00000394888 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 MSH4O15457 936 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 N4BP1O75113 896 aaKnown RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 HLA-DOAP06340 250 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 ECE1P42892 770 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 BORCS6Q96GS4 357 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
CPSF7-202ENST00000394888 TMEM179Q6ZVK1 233 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 CYP2C19P33261 490 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 SLC1A4P43007 532 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 KIF11P52732 1056 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
CPSF7-202ENST00000394888 USP14P54578 494 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 ICA1Q05084 483 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 MYOCDQ8IZQ8 938 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 ASTN1O14525 1302 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 SLC26A4O43511 780 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 CYP3A4P08684 503 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 AP3B2Q13367 1082 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 B3GNT9Q6UX72 402 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 COG1Q8WTW3 980 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 COL4A3BPQ9Y5P4 624 aa17.06■□□□□ 0.32
CPSF7-202ENST00000394888 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-202ENST00000394888 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 RHOXF2BP0C7M4 288 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 KCNA1Q09470 495 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 SYT2Q8N9I0 419 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-202ENST00000394888 RHOXF2Q9BQY4 288 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 SIX2Q9NPC8 291 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 GH2P01242 217 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 RPA1P27694 616 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-202ENST00000394888 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
CPSF7-202ENST00000394888 OAS2P29728 719 aaKnown RBP17.05■□□□□ 0.32
CPSF7-202ENST00000394888 ACER1Q8TDN7 264 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 RUSC1Q9BVN2 902 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 ARFGAP3Q9NP61 516 aa17.05■□□□□ 0.32
CPSF7-202ENST00000394888 DOCK5Q9H7D0 1870 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 IDEP14735 1019 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-202ENST00000394888 GYS2P54840 703 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
CPSF7-202ENST00000394888 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms