RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SERPING1P05155 500 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 TNNI1P19237 187 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 CASP7P55210 303 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 SARNPP82979 210 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 MB21D1Q8N884 522 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 EEF2KMTQ96G04 330 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 STRBPQ96SI9 672 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 NDST4Q9H3R1 872 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 C1orf112Q9NSG2 853 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 TMOD4Q9NZQ9 345 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 DDX60Q8IY21 1712 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 HMGB1P1B2RPK0 211 aaPredicted RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 GMNNO75496 209 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 AFPP02771 609 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 MYCLP12524 364 aaPredicted RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 PDE6CP51160 858 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 NLRX1Q86UT6 975 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 TBC1D31Q96DN5 1066 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 HOOK2Q96ED9 719 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 AIFM3Q96NN9 605 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 RAB20Q9NX57 234 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 USH1CQ9Y6N9 552 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 VGLL3A8MV65 326 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 CCDC188H7C350 402 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 NTSR2O95665 410 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 IFNB1P01574 187 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 CLTAP09496 248 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 GOLGA8HP0CJ92 632 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 RNASELQ05823 741 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 HADHQ16836 314 aaKnown RBP9.14□□□□□ -0.95
VPS36-201ENST00000378060 CCDC144BQ3MJ40 725 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 ZNF354CQ86Y25 554 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 PALM2Q8IXS6 379 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 SLC17A8Q8NDX2 589 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 EPSTI1Q96J88 318 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 STK38LQ9Y2H1 464 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 RABGAP1Q9Y3P9 1069 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 PCDHA1Q9Y5I3 950 aa9.14□□□□□ -0.95
VPS36-201ENST00000378060 KIF3CO14782 793 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ATF2P15336 505 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 KIF11P52732 1056 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 IL9RQ01113 521 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 NNTQ13423 1086 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 CUL1Q13616 776 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 AMNQ9BXJ7 453 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ZNF804BA4D1E1 1349 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 DDX39AO00148 427 aaKnown RBP9.13□□□□□ -0.95
VPS36-201ENST00000378060 ZMYND10O75800 440 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 MMP10P09238 476 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 PSMC2P35998 433 aaKnown RBP9.13□□□□□ -0.95
VPS36-201ENST00000378060 MAGEA9P43362 315 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 GTF2IP78347 998 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 PPP1R2P3Q6NXS1 205 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 PPP4R3CPQ6ZMV5 832 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 SUPT20HQ8NEM7 779 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 RSAD2Q8WXG1 361 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 TRIM11Q96F44 468 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 MIS12Q9H081 205 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 DISC1Q9NRI5 854 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 PCDHA13Q9Y5I0 950 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.13□□□□□ -0.95
VPS36-201ENST00000378060 SPEF2Q9C093 1822 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 LGALS16A8MUM7 142 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 MYO1FO00160 1098 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 NR1D1P20393 614 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 POLR2BP30876 1174 aaKnown RBP9.13□□□□□ -0.95
VPS36-201ENST00000378060 SLMAPQ14BN4 828 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ALX1Q15699 326 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ANKRD35Q8N283 1001 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 PPM1KQ8N3J5 372 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 GJA10Q969M2 543 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 POLR2MP0CAP2 368 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 BTDP43251 543 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 SEPT6Q14141 434 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 MUM1Q2TAK8 710 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 ARMCX5Q6P1M9 558 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 NSMFQ6X4W1 530 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
VPS36-201ENST00000378060 P4HA1P13674 534 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 TPD52P55327 224 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 FOXO4P98177 505 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 SLFN13Q68D06 897 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PI16Q6UXB8 463 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 CPXCR1Q8N123 301 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms