RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MBOAT7Q96N66 472 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 TSG101Q99816 390 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 CRACR2AQ9BSW2 395 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 LRRC27Q9C0I9 530 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 LACRTQ9GZZ8 138 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 HDAC6Q9UBN7 1215 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 HERC5Q9UII4 1024 aaKnown RBP17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 HDAC9Q9UKV0 1011 aa17.73■□□□□ 0.43
CNKSR1-202ENST00000374253 RSPH10B2B2RC85 870 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 RSPH10BP0C881 870 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 ZBED6P86452 979 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 LRRC63Q05C16 580 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 CCDC122Q5T0U0 273 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 KIAA1328Q86T90 577 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 SCFD1Q8WVM8 642 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 ERGIC2Q96RQ1 377 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 NAP1L4Q99733 375 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 ZNHIT6Q9NWK9 470 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 ZBTB39O15060 712 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 MAN2A1Q16706 1144 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 SIK3Q9Y2K2 1263 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 PCDHA2Q9Y5H9 948 aa17.72■□□□□ 0.43
CNKSR1-202ENST00000374253 SFI1A8K8P3 1242 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 PSMD2Q13200 908 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 CTTNQ14247 550 aaKnown RBP17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 BTNL9Q6UXG8 535 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 PIGOQ8TEQ8 1089 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 MEA1Q16626 185 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 Q4G0T1 1027 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 RRAGAQ7L523 313 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 FEZ1Q99689 392 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 REEP2Q9BRK0 252 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 NUP58Q9BVL2 599 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 BHMT2Q9H2M3 363 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 NLRC4Q9NPP4 1024 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 ST7Q9NRC1 585 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 EMILIN3Q9NT22 766 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 OGFRQ9NZT2 677 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 CDC23Q9UJX2 597 aa17.71■□□□□ 0.43
CNKSR1-202ENST00000374253 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 EGFRP00533 1210 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 CHMP4BP1P59074 171 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 ZCWPW2Q504Y3 356 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 GOPCQ9HD26 462 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 DNM3Q9UQ16 869 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 LRRC53A6NM62 1247 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 ZNF263O14978 683 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 POLD1P28340 1107 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 RSRC2Q7L4I2 434 aaKnown RBP17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 SFR1Q86XK3 245 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 VAV3Q9UKW4 847 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 COL4A3BPQ9Y5P4 624 aa17.7■□□□□ 0.42
CNKSR1-202ENST00000374253 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 FKBP3Q00688 224 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 CXCL9Q07325 125 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 GIT2Q14161 759 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 JAKMIP2Q96AA8 810 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 ARHGAP20Q9P2F6 1191 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 NIM1KQ8IY84 436 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 GOLGA1Q92805 767 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 CCDC42Q96M95 316 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 PSMD1Q99460 953 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 EIF2AK1Q9BQI3 630 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 PARD6BQ9BYG5 372 aa17.69■□□□□ 0.42
CNKSR1-202ENST00000374253 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 FGFR1OPO95684 399 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 MYBP10242 640 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 RPA1P27694 616 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 CYLC1P35663 651 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 MMP14P50281 582 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 KCNMA1Q12791 1236 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 MOXD1Q6UVY6 613 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 TPH2Q8IWU9 490 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 WNT10BO00744 389 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 ZBTB7AO95365 584 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 ATP1A1P05023 1023 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 KCNA1Q09470 495 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms