RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 FLT3P36888 993 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SSR1P43307 286 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 DGKGP49619 791 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 AOC3Q16853 763 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 NKAPLQ5M9Q1 402 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CHCHD4Q8N4Q1 142 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 U2AF1L4Q8WU68 220 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 RAPGEF4Q8WZA2 1011 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 IP6K1Q92551 441 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 PAWRQ96IZ0 340 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SEZ6LQ9BYH1 1024 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SRCIN1Q9C0H9 1055 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 RNF208Q9H0X6 261 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 LGR6Q9HBX8 967 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CNOT7Q9UIV1 285 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 USP24Q9UPU5 2620 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 POLR2AP24928 1970 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SNED1Q8TER0 1413 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 GOLGA6L6A8MZA4 724 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 HYAL3O43820 417 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 TGFB3P10600 412 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CLK1P49759 484 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SP3Q02447 781 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 PRKG1Q13976 671 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 GRM2Q14416 872 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 TTF1Q15361 905 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 LONRF1Q17RB8 773 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 HYIQ5T013 277 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CC2D1BQ5T0F9 858 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 LARP1BQ659C4 914 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 PDXDC1Q6P996 788 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 ANKRD13BQ86YJ7 626 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 WFDC8Q8IUA0 241 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CCNJLQ8IV13 435 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 NIM1KQ8IY84 436 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 RTKN2Q8IZC4 609 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 CPXCR1Q8N123 301 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 NXPE3Q969Y0 559 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 FEZ1Q99689 392 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 SELENOOQ9BVL4 669 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 BCO2Q9BYV7 579 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 ADAM19Q9H013 955 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 TRIM33Q9UPN9 1127 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 MYO15AQ9UKN7 3530 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 SPTBN2O15020 2390 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 REV3LO60673 3130 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 SPDYE3A6NKU9 549 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 GNB5O14775 395 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 ORC4O43929 436 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 EIF4BP23588 611 aaKnown RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 DDIT3P35638 169 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 AFF1P51825 1210 aaKnown RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 CABP4P57796 275 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 RACK1P63244 317 aaKnown RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 SREBF2Q12772 1141 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 DCTN1Q14203 1278 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 TAF11Q15544 211 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 GRIK5Q16478 980 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 GDF6Q6KF10 455 aaPredicted RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 PI16Q6UXB8 463 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 C16orf86Q6ZW13 317 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 ERMP1Q7Z2K6 904 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 LCA5Q86VQ0 697 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 HSCBQ8IWL3 235 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 NDUFAF2Q8N183 169 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 MYO1HQ8N1T3 1032 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 PPHLN1Q8NEY8 458 aaKnown RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 CCDC47Q96A33 483 aaKnown RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 CDHR1Q96JP9 859 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 DEPDC7Q96QD5 511 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 TCF12Q99081 682 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 LACRTQ9GZZ8 138 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 CSRNP2Q9H175 543 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 ZFYVE1Q9HBF4 777 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 CD320Q9NPF0 282 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 SNTG2Q9NY99 539 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 GGA3Q9NZ52 723 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 NARFQ9UHQ1 456 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 EVLQ9UI08 416 aaPredicted RBP4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 ATP8A1Q9Y2Q0 1164 aa4.15□□□□□ -1.74
ECHDC1-205ENST00000368295 SOS1Q07889 1333 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-205ENST00000368295 RIF1Q5UIP0 2472 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-205ENST00000368295 LAMB2P55268 1798 aa4.15□□□□□ -1.75
ECHDC1-205ENST00000368295 DYRK3O43781 588 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 GJB1P08034 283 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 NID1P14543 1247 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 RRM1P23921 792 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 TDO2P48775 406 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 GEMIN4P57678 1058 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 PTPN12Q05209 780 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 HSP90AA2PQ14568 343 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 UVSSAQ2YD98 709 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 ZNF394Q53GI3 561 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 KSR2Q6VAB6 950 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 C8orf86Q6ZUL3 223 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 KIAA1958Q8N8K9 716 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 ASAP3Q8TDY4 903 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 DCAF11Q8TEB1 546 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 BSNDQ8WZ55 320 aa4.14□□□□□ -1.75
ECHDC1-205ENST00000368295 DCPSQ96C86 337 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms