RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ID4P47928 161 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 MECP2P51608 486 aaKnown RBP7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 SART3Q15020 963 aaKnown RBP7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 EFCAB2Q5VUJ9 269 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 RNF219Q5W0B1 726 aaPredicted RBP7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 Q8N1Y9 231 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 TRMT2BQ96GJ1 504 aaKnown RBP7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 B4GALT6Q9UBX8 382 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 TMEM59LQ9UK28 342 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 G3BP2Q9UN86 482 aaKnown RBP7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 ZKSCAN5Q9Y2L8 839 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 RWDD3Q9Y3V2 267 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 ATP10AO60312 1499 aa7.61□□□□□ -1.19
RNU4-39P-201ENST00000362455 HECW1Q76N89 1606 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 TTC37Q6PGP7 1564 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ZEB2O60315 1214 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 GAS7O60861 476 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 KATNA1O75449 491 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 FUCA1P04066 466 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 PRNPP04156 253 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ITGB7P26010 798 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ADCYAP1R1P41586 468 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 RTP1P59025 263 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 IL2P60568 153 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 HSF5Q4G112 596 aaPredicted RBP7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ODR4Q5SWX8 454 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 CEP128Q6ZU80 1094 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 NECAB2Q7Z6G3 386 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 SPATS2Q86XZ4 545 aaKnown RBP7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 PANK1Q8TE04 598 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 SLC5A4Q9NY91 659 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ADGRE2Q9UHX3 823 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 APOBEC2Q9Y235 224 aaKnown RBP7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ZFYVE16Q7Z3T8 1539 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 ARHGEF12Q9NZN5 1544 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 RICTORQ6R327 1708 aa7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
RNU4-39P-201ENST00000362455 PTPDC1A2A3K4 754 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 C22orf46C9J442 243 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 MED26O95402 600 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 PDE6AP16499 860 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 CRY1Q16526 586 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 C2orf69Q8N8R5 385 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 ANKS4BQ8N8V4 417 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 NLGN2Q8NFZ4 835 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 PLEKHO2Q8TD55 490 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 GPR101Q96P66 508 aaPredicted RBP7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 MTA3Q9BTC8 594 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 CRTAC1Q9NQ79 661 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 PRDM7Q9NQW5 492 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 THG1LQ9NWX6 298 aaKnown RBP7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 X6R8D5 127 aa7.59□□□□□ -1.19
RNU4-39P-201ENST00000362455 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 FKBP9O95302 570 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 GNAT1P11488 350 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 ATP2A2P16615 1042 aaKnown RBP7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 HK2P52789 917 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 CORO7P57737 925 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 LACTBP83111 547 aaPredicted RBP7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 RBM10P98175 930 aaKnown RBP7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 FKBP9P1Q75LS8 142 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 LZTR1Q8N653 840 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 CHTF18Q8WVB6 975 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 JDP2Q8WYK2 163 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 EPB41L1Q9H4G0 881 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 FBLN5Q9UBX5 448 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 CCDC39Q9UFE4 941 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 COA3Q9Y2R0 106 aaPredicted RBP7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 TAF6LQ9Y6J9 622 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 C9orf84Q5VXU9 1444 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 DISP3Q9P2K9 1392 aa7.58□□□□□ -1.2
RNU4-39P-201ENST00000362455 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 A0A1W2PQC6 194 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 A0A1W2PQD8 194 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 PARNO95453 639 aaKnown RBP7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 COL6A2P12110 1019 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 KRT15P19012 456 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 LSSP48449 732 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 JAM2P57087 298 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 SPIRE1Q08AE8 756 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 MTMR1Q13613 665 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 GPR19Q15760 415 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 SLC14A2Q15849 920 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 OSTM1Q86WC4 334 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 COG1Q8WTW3 980 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 ASIC4Q96FT7 647 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 ASPSCR1Q9BZE9 553 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 THRAP3Q9Y2W1 955 aaKnown RBP7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 EFCAB5A4FU69 1503 aa7.57□□□□□ -1.2
RNU4-39P-201ENST00000362455 EEA1Q15075 1411 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms